Solanum dulcamara (climbing nightshade): 129875925
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Entry
129875925 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129875925
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129875925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129875925
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
129875925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
Tau95
TFIIF_beta_N
WHD_UBR1
HTH_32
Motif
Other DBs
NCBI-GeneID:
129875925
NCBI-ProteinID:
XP_055807140
LinkDB
All DBs
Position
12:16789693..16790520
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AA seq
275 aa
AA seq
DB search
MAEKITGTTPKTTVHGVTMNDHLETRNADRRVWLMKCPTVVSRFFEQHQHSSSSTPLSSA
VSPGPVAKVTVVVDPLLTNDATQFTMDLDGTSSGNMPTHYSMDMSTDFIPMSIFSESGQG
RVSVEGKIYHKFDMKPYHENIENYGKLCRERTNKYMTKSRQIQVIDNDNAKHMRPMPGLF
ETKASGSADNKKVPSKGLEMKRTRRDRDEMEEIMFKLFERQPNWTLKQLVHETDQPEQFM
KDMLKILCIYNNKGAHQGTYELKPEYKRSEDKADS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaatcaccggaacgactcctaagaccaccgtgcacggtgttacgatgaac
gaccatttggagacgagaaatgcagaccgacgtgtgtggttgatgaaatgccctaccgtt
gtctctcgattctttgaacaacatcaacactcttcttcttcaactcctctttcttccgct
gtttctcctggacctgttgcaaaagtcaccgttgtcgttgaccctctcctcaccaatgat
gcaactcagtttaccatggatttggatggaacttcatctggtaacatgcccactcactac
tccatggacatgtcgacagattttattccaatgtctatattttctgagtcaggtcaagga
agggtttccgtggaaggaaagatatatcacaaatttgacatgaagccttatcatgaaaac
attgagaactatggaaaactttgccgtgaaaggaccaataagtacatgacgaaaagtaga
caaattcaggttattgacaatgataatgcaaaacatatgaggcctatgcctggattattc
gaaactaaggcttctggatctgcagataacaaaaaggtgccaagtaaaggattagaaatg
aaaagaacaaggagggaccgtgacgaaatggaagaaatcatgttcaaactctttgagagg
caaccaaattggactctgaaacagctggtccatgagactgaccaaccagagcaatttatg
aaagacatgctcaaaattctctgcatctacaacaataagggcgctcatcaaggcacttat
gagctgaagccagagtacaagagatcagaagacaaggctgattcttga
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