KEGG   Solanum dulcamara (climbing nightshade): 129875955
Entry
129875955         CDS       T09577                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129875955
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sdul01009]
    129875955
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129875955
   03036 Chromosome and associated proteins [BR:sdul03036]
    129875955
Protein phosphatases and associated proteins [BR:sdul01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     129875955
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     129875955
Chromosome and associated proteins [BR:sdul03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     129875955
SSDB
Motif
Pfam: B56 TetR_C_16
Other DBs
NCBI-GeneID: 129875955
NCBI-ProteinID: XP_055807186
LinkDB
Position
12:complement(5367446..5374893)
AA seq 492 aa
MLNKIIKRGHKKVPKSEVSDFGHAPPAGGRNSGNVSTSDVVVNHASRGNMVTNSIQSQQT
PSVMTSAAPAPGNIENLPLFRDVPLSERQVLFFRKLQICCFQFDFTDTMKLVREKEIKRQ
TLVELVDYVQSGAGKISESNQEEMVKMISVNIFRCLPPGSHENTGSENVEQEEDEPCLEP
SWPHLQLVYELLLRYVVSSDSDTKLAKRFIDHSFVLKLLDLFDSEDPREREYLKTILHRV
YGKFMVHRPFIRKGINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVR
ALIPLHKPKPVAMYHQQLSYCIVQFVEKDYKLSDTVIRGLLKYWPVTNCQKEVLFLQELE
EVLETTQAAEFQRCMVPLFRQIARCLNSPHFQVAERALFLWNNEHLVGLIAQNRNVIFPI
IFDALQKNIDNHWNQAIHGLTVNVRKMFMEMDADLFDECQRQYSEKAARATELEEQRELR
WQRLAAAATQGC
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgttgaataaaatcataaagcgagggcataaaaaggtgcctaaatcagaagtatctgat
tttggtcacgcgccgccggcgggaggtaggaattccggcaatgtttcgacgtctgatgtg
gtggtgaatcatgcttcgagaggaaacatggtaacgaattctattcaatcacaacagaca
ccttcagtgatgacatctgcagctccagcaccgggaaacattgagaaccttcccttgttt
cgtgacgtgccgctatccgaacgtcaagtgttgttttttaggaaactacagatttgttgt
tttcagtttgatttcacagatacgatgaaacttgtaagggagaaagagataaagaggcaa
acacttgtggagcttgtagattatgttcaatctggtgctggaaaaatcagtgaaagtaat
caagaagaaatggtaaagatgatatcagtgaatatatttcgttgtttacctccgggttct
catgagaatacaggatccgaaaatgtggaacaggaagaggacgagccatgtcttgagcca
tcttggcctcatttacagcttgtgtatgaattgctgttgaggtatgtggtttcatcagat
tctgatacaaagttagctaaacgctttattgatcactcgtttgtattgaagttattggat
ttgtttgattccgaggacccaagggagagagagtatttgaaaacaatacttcaccgcgta
tatgggaagtttatggtgcatagaccatttataaggaagggaatcaataacatcttttat
aggtttatatatgagacagagaggcacagtgggataggtgagttactagagattctaggg
agtattataaatggttttgcgttgcccatgaaagaggaacacaagctattccttgttcgg
gcactcataccactgcacaaaccgaaaccggttgcaatgtatcatcagcagttatcctac
tgtattgttcagtttgttgaaaaggattacaagttgtccgatacagttataaggggtttg
ttgaaatactggcctgtcaccaattgccaaaaggaagtcctctttcttcaggagcttgaa
gaagtgttggaaaccacacaggcggcagaatttcagcgttgcatggttcctctttttaga
cagattgctcgttgccttaacagcccacacttccaggttgcagagcgagccctatttcta
tggaacaatgagcacctagtgggattgatcgcccagaaccgcaatgtcattttcccgatc
atttttgatgctctgcaaaagaacatagataatcattggaatcaagctatccatgggctg
actgtaaatgttcgcaaaatgttcatggaaatggatgctgatctgttcgatgagtgccaa
agacagtattctgagaaagcagctcgggccactgaactggaagagcagcgagaactaaga
tggcagagattagcagctgctgcaacacaaggatgctaa

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