KEGG   Solanum dulcamara (climbing nightshade): 129876025
Entry
129876025         CDS       T09577                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129876025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdul03041]
    129876025
Spliceosome [BR:sdul03041]
 Complex A
  U2 snRNP components
   U2 related factors
    129876025
 Complex B
    129876025
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus SMEK_N
Other DBs
NCBI-GeneID: 129876025
NCBI-ProteinID: XP_055807281
LinkDB
Position
12:complement(5065013..5069506)
AA seq 350 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLVLSNMYQRPDMITP
GVDPQGQPLDPRQIQRHFEDFYEDLFEELSKYGELENLNICDNLADHMVGNVYVQFREED
HAASALQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
RRQLFGKSSRRRRSHSRSRSPRGNRNFEEQRPQGGRGFGRRGGGGGGDRYHDRGRRPRSR
SPGRRSGHSRSPGGRRNRSPIREGSEERRAKIEQWNREKEEAGSGRNHGGGTRREDREGS
AERRAKIEQWNREKEEADSAKYDNFDTDNGRNDGGDHYGEQFDDDFPKQQ
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggcggagcatttggcttctatattcggtacggagaaagacagggtaaattgccctttc
tacttcaagatcggtgcgtgtcggcatggtgaccgttgttccaggcttcacacaaagcct
agcatcagtccgaccttagttttatctaatatgtatcagcgacctgatatgatcacccct
ggtgttgatcctcaaggccagccccttgatccccgccagatccagcgccacttcgaggac
ttctatgaagatttgtttgaagagcttagcaagtatggagagcttgaaaaccttaacatc
tgcgacaatttagctgaccacatggttggtaatgtttatgtccagttcagagaggaagat
catgctgcaagtgctcttcagaatcttactggaagattttatgcaggacgtccaatcatt
gtcgacttctccccagtgactgatttccgggaagccacttgtaggcagtatgaggaaaat
gtatgtaaccgaggcggctattgcaacttcatgcatctgaaaaagataagcagggagttg
aggcggcaattatttgggaagagtagtaggcgaaggcgcagccatagtagaagccgaagt
ccgcgtggtaatcgcaatttcgaagagcagcgcccacagggaggccgtggttttggtaga
agaggaggtggaggaggtggtgatcgctaccatgatagagggagaaggcctagaagcaga
agtcctggacgaaggagcggacacagcagaagtcctgggggaaggagaaatagaagtcca
attagggaaggaagtgaggagagaagagcaaagattgaacaatggaacagggaaaaggaa
gaggcaggatctgggaggaatcatggcggtgggacacgtagggaagacagggaaggcagt
gctgagaggagggcaaagattgagcaatggaatagagagaaagaagaggcagattctgct
aaatacgataattttgacactgacaatggcaggaatgatggtggtgatcactatggagaa
cagtttgatgatgatttcccgaagcagcagtag

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