Solanum dulcamara (climbing nightshade): 129876041
Help
Entry
129876041 CDS
T09577
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00906
Carotenoid biosynthesis
sdul01100
Metabolic pathways
sdul01110
Biosynthesis of secondary metabolites
Module
sdul_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
129876041
Enzymes [BR:
sdul01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
129876041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GDI
HI0933_like
Pyr_redox_2
FAD_oxidored
Thi4
GIDA
FAD_binding_3
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
129876041
NCBI-ProteinID:
XP_055807303
LinkDB
All DBs
Position
12:complement(4001745..4010472)
Genome browser
AA seq
615 aa
AA seq
DB search
MGTLNFMFPNSLLDGTCKIVALGDSKPRYNKQRSSCFNPLRIGNCTDHQQLYGLSWGVDK
AKGRRGGTVSNLKAVVDVDKRVETYGSSDVEGNESGSYDAIVIGSGIGGLVTATQLAVKG
AKVLVLEKYVIPGGSSGFYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGRKLEVIP
DPTTVHFHLPNDLSVRIHREYDDFIEELVSKFPHEKEGIIKFYGECWKIFDSLNSLELKS
LEEPIYLFGQFFKKPLECLTLAYYLPQNAGSIARKYIRDPGLLSFIDAECFIVSTVNALQ
TPMINASMVLCDRHFGGINYPVGGVGEIAKSLAKGLDDHGSRILYRANVTSIILDNGKAV
GVKLSDERKFYAKTIVSNATRWDTFGKLLKAENLPKEEENFQKAYVKAPSFLSIHMGVKA
DVLPPDTDCHHFVLEDNWTNLEKPYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSIEDWE
GLSRKDYEAKKELVAERIISRLEKTLFPGLKSSILFKEVGTPKTHRRYLARDSGTYGPMP
RGTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGFEKKSDVL
DSALLRLLGWLRTLA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccttgaattttatgtttcctaattcacttcttgatggtacctgcaagattgta
gctttgggtgatagcaaacccagatacaataaacaaagaagttcttgttttaacccattg
agaattggaaattgtactgatcaccaacagctttatggcctgagttggggggtggacaag
gctaagggaagaagagggggtactgtttccaatttgaaagcagttgtagatgtagacaaa
agggtggagacctatggaagtagtgatgtagaaggaaatgagagtggcagttatgatgcc
attgttatagggtcaggaataggtggattggtgacagcgacacagctggcggttaaggga
gctaaggttttagtcttggagaagtatgttattcctggtggaagctccggcttttacgag
agggatggttatacgtttgatgttggttcatcagtgatgtttgggttcagtgataaggga
aacctcaatttaattactcaagcattggcagcagtaggacgtaaactagaagttatacct
gacccaacaactgtacatttccacctgccaaatgacctttctgttcggatacacagagaa
tatgatgacttcattgaagagcttgtgagtaaatttccacatgaaaaggaaggaattatc
aaattctacggtgaatgctggaagatctttgattctctgaattcattggaactgaagtct
ttggaggaacccatctacctttttggccagttttttaagaagccccttgaatgcttgact
cttgcctactatttgccccagaatgctggtagcattgctcggaagtatataagagatcct
gggttgctttcctttatagatgcagagtgctttattgtgagtacagttaatgcattacaa
acaccaatgatcaatgcaagcatggttctatgtgacagacattttggcggaatcaactac
cctgttggtggagttggcgagattgccaaatccttagcaaaaggcttggatgatcacgga
agtcggatactttatagggcaaatgtcacaagtatcattttggacaatggcaaagctgtg
ggagtgaagctttctgacgagaggaagttttatgctaaaaccatagtatcgaatgccacc
cgatgggatacctttggaaaacttttaaaagctgagaatctgccaaaagaagaagaaaat
ttccagaaagcttatgtaaaagcaccttcttttctttctattcatatgggggttaaagca
gatgttctcccaccagacactgattgccaccattttgtccttgaggataattggacaaat
ttggagaaaccatatggaagtatattcttgagcattccaacagttcttgattcctcattg
gccccagaagggcaccatattcttcacatttttacaacatcgagcattgaagattgggag
ggactctctcggaaagactatgaagcgaagaaagagcttgttgctgaaaggattataagc
agacttgaaaaaacactcttccccgggctcaagtcatcaattctctttaaggaggtggga
acaccaaagacccacaggcgatacctcgctcgtgatagtggtacctatggaccaatgcca
cggggaacaccgaagggattactgggaatgcctttcaataccactgctatagatggtcta
tactgtgttggcgatagttgctttccaggacaaggcgttatagctgtagccttttcagga
gttatgtgcgctcatcgtgttgcagctgacttagggtttgaaaaaaaatcagatgtgctg
gacagtgctcttcttaggctacttggttggttaaggacactagcatga
DBGET
integrated database retrieval system
