Solanum dulcamara (climbing nightshade): 129876089
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Entry
129876089 CDS
T09577
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00900
Terpenoid backbone biosynthesis
sdul01100
Metabolic pathways
sdul01110
Biosynthesis of secondary metabolites
Module
sdul_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
129876089
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sdul01006
]
129876089
Enzymes [BR:
sdul01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
129876089
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
129876089
Prenyltransferases [BR:
sdul01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
129876089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
129876089
NCBI-ProteinID:
XP_055807374
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All DBs
Position
12:complement(67250508..67256681)
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AA seq
403 aa
AA seq
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MYLQQKGRLLLINCKCSLPFFNQIHSYLFPINSKEEHCITNTQKFSSFSEINEHNHSFSG
NMSDLKSKFLGVYKELKSELLKDSDFEFTDDSRQWVEQMLDYNVLGGKLNRGLSVIDSYS
LLKEGKELTSEEISQTSFLGWCIEWLQAYFLVLDDIMDGSQTRRGQPCWFRKPKVGMIAV
NDGLLLRNHIPRILKNHFKGKPYYVDLLELFNEVEFQTASGQMIDLITTHAGEKDLSKYS
LSLHRRIVQFKTAYYSFYLPVACALLVAGENLDDHVNIKDILIKMGIYFQVQDDYLDCFA
DPEVLGKNGTDIQDFKCSWLVVKALEHCNEEQKKLLHENYGKDDLACVANVKALYNDLKL
EDVYLEYEKNKYKELINLIEDQPSKAVQAVLKSFLSKIYKRQK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtacttgcaacaaaaagggagattgctcctcataaattgcaagtgctctttgcccttt
ttcaaccaaatacatagctatttgtttcctataaattcaaaagaagaacactgtatcaca
aatacccaaaagttctcttctttctctgaaattaacgaacacaaccattctttcagtgga
aacatgagcgatttgaaatccaagttcttgggggtttacaaagaactgaaatctgagctt
cttaaagattcagatttcgagtttactgatgatagtcgtcaatgggtcgaacagatgtta
gactacaatgtacttggaggaaagctgaaccgcgggctctctgttattgatagctacagt
ttgttgaaagaggggaaagaactaaccagtgaggagatctctcaaacatctttccttggc
tggtgcattgaatggcttcaagcatatttccttgttcttgatgatataatggatggctcc
caaacacgccgaggccaaccatgctggttcagaaaacccaaggttggcatgattgctgtt
aatgatggcctacttcttcgcaaccacatcccaagaatactgaagaaccactttaaagga
aagccttattatgttgatcttcttgaattgtttaatgaggtggaattccagactgcctct
ggacaaatgattgatttgattaccacacatgctggagagaaagatttatcaaaatactca
ttgtctcttcatcgacggattgtccagtttaaaactgcttattattcattttatctccca
gtggcatgtgcacttcttgtggcaggagagaatcttgacgatcatgttaatatcaaggac
atactcatcaaaatgggaatatatttccaagttcaggatgattacctggactgctttgct
gatccagaggtgttgggtaagaatggcacggatattcaagatttcaagtgctcttggttg
gtagtgaaagccctagaacactgcaacgaggagcaaaagaagttattacatgagaactat
ggaaaagatgaccttgcttgtgttgctaatgttaaggcgctttacaatgatctcaaactt
gaggatgtgtacctggaatatgagaagaataaatataaagagctgatcaacttaattgaa
gatcaaccaagcaaagcagtgcaagcagttctcaagtcattcttgtcaaagatatataag
aggcagaagtag
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