KEGG   Solanum dulcamara (climbing nightshade): 129876126
Entry
129876126         CDS       T09577                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03250  Viral life cycle - HIV-1
sdul03272  Virion - Hepatitis viruses
sdul04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129876126
   03272 Virion - Hepatitis viruses
    129876126
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129876126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdul04131]
    129876126
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdul04147]
    129876126
Membrane trafficking [BR:sdul04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    129876126
Exosome [BR:sdul04147]
 Exosomal proteins
  Proteins found in most exosomes
   129876126
SSDB
Motif
Pfam: UEV Vps23_core UQ_con Med21 CENP-F_leu_zip DEC-1_N Spc7 CC_Bre1 APG6_N
Other DBs
NCBI-GeneID: 129876126
NCBI-ProteinID: XP_055807433
LinkDB
Position
12:7720835..7724300
AA seq 401 aa
MVPPNSQQIQQFLSSVLSQRGPSALPYTEDVKWLIRQHLLSLIDIYPSLQPKTASFTHND
GRTVNLLQAVGTVPMVYLNITYNIPVIIWLMESYPRHPPLVFVNPTRDMVVKRSHPFVNP
SGVVSIPYLQNWIYPSSNLTELVRNLSHFFGRDPPLYAKVQAPPSNPNPSPRPSPNPHPP
PSTSFSNHNSPVGSSGIRPAIPPRAYQPPPYGEVKTDNPEEVYRRNAIDMLVVSLHKDIV
GLKETQEKDVDGLVNAQGVLKQREKQLKQGLKEMQDEKEGLEQQLQMVLMNSDVLEGWLR
ENEGKVTSLGNVDVDTAFEPCDDLSKQMLDCTASDLALEDVIYSLDKAIQGGAIPFDQYL
RNIRLLSREQFFHRATASKVRAAQMQAQVANMAARTSPYAL
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggtgcctccaaattcccaacaaatccagcaattcctcagcagtgttctctctcagcgt
ggtccttctgcacttccttatactgaagatgtcaaatggttgatccgtcaacatctgctt
tctttaatcgacatttatccttcacttcagccgaaaacagcttctttcactcataatgat
ggacgtactgtcaatctattgcaggctgtaggtactgttccgatggtttatttgaatatt
acgtataatattccggtgattatttggttaatggaatcttacccacgtcatccgcctttg
gtttttgtgaatccgacaagggatatggttgttaaacgatctcatccgtttgtgaatcca
tctggggttgtgtcgattccttatttgcagaattggatataccctagttcgaatcttact
gaattggttcgtaatttgagtcatttttttggacgggatcctccgctttatgcgaaagta
caagcacctccatcaaaccctaaccctagtcctagacctagtcctaaccctcatcctccg
ccaagtacgagtttttctaatcacaattcgccagttgggtcatctggaatccgacccgca
atacctcctcgggcatatcaaccaccaccctatggtgaagtgaaaacggataatccggag
gaggtttataggcggaacgcgatagatatgctggttgttagcttgcataaggatatagta
gggttgaaggaaacacaggagaaggatgtggatgggttggttaatgctcagggagtattg
aagcagcgagagaagcagttgaaacagggtttaaaggaaatgcaggatgagaaagagggg
ctggagcagcaattacagatggttctgatgaatagtgatgtattagagggatggctgagg
gaaaatgaggggaaagtgaccagtttagggaatgtggatgtggatacagcgtttgagccc
tgtgatgatctttccaagcagatgctagattgcacggcatcagatttggctttagaagat
gtgatttattcgttggacaaagccatacagggtggggcaataccatttgaccagtacttg
aggaacataaggttgttatcgcgcgagcaattctttcatcgcgctacagcatcaaaagtt
agggctgctcagatgcaagctcaagttgctaatatggctgctagaacatcaccatatgca
ttgtga

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