Solanum dulcamara (climbing nightshade): 129876142
Help
Entry
129876142 CDS
T09577
Name
(RefSeq) protein FRIGIDA-ESSENTIAL 1-like
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129876142
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
129876142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_9
SCAF11-like_C
zf-CCCH_4
STAG
Motif
Other DBs
NCBI-GeneID:
129876142
NCBI-ProteinID:
XP_055807454
LinkDB
All DBs
Position
12:63399910..63411854
Genome browser
AA seq
634 aa
AA seq
DB search
MPSSVAAADPLTNNLVSIHKISANEDEEYEKIEVEEENSEGSATLDDVDHKKDGTRILEP
LGLKEHLRSGIPTRKPVANPDIPMIEEGNDSYRISNYDERRGKNYSSLDGKRTIVLSDLR
ALRCDSGETRTHENQPFGQKVSAEFTEGSHQQVSQDLQQTSSRLDAQETWARSLTPPADS
SGGNKRPADRCEFYSTGWCINGGSCRFLHVREPVISRNKDGFLDTAKMKNKLINGEGSKD
TTERSAPDCFSDLSSSEVQCRENQRLNSDNYLHMHKDEDRSSMPFRDIGRETLGYKSHLA
GYGSSSQPLPKADSLSKDSYCSEMPPSSSVLSSYKYLNTEVPSYASALDDTSYKRTHLMP
DYHHFPILNRSVDRWPSNLTSSSSNLDPVGNHKLLDCSREYCYSRSMSLHNKSSALPGCG
TESFSWTDLSGDMEHSCGYKTKVYFNDWENSVPFRPSTFLSQIIPPPESLYDPIRDSIEQ
TSTAEKDLSANERKTTDRAIAHQENMNTSSKEEKHSPRGQKRKQSKLENLGPSCEIDTDF
RRDGSVNYESGVMKHFRAALVDFIKELLKPTWHEGLLMKDAYKMIVKKAVDKIINSLTPD
QVPDTTESINQYLSVSKPKVAKLIEGYVEKYGKS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgtcggttgcggcggctgatccactaaccaataacttagtctcgatacacaaa
atctcagctaacgaggacgaagagtacgaaaaaattgaggttgaagaagaaaatagcgaa
ggatcagctacactcgatgatgtagatcataaaaaagatggaacccgcattctggagcct
ttgggtcttaaagagcatttaagatcaggaattcctactcgaaaacctgtagcaaatcct
gatatacctatgattgaagagggtaatgacagttacaggatatctaattatgatgaaaga
agaggaaagaattattcaagtttggatggaaaaagaaccattgtactttctgatctccga
gctcttagatgtgatagtggggaaacaagaacccatgaaaaccagccgtttggtcaaaaa
gtgagtgctgaattcactgaaggaagtcatcaacaagtgtcgcaggatttacaacaaaca
tcatcaaggttggatgctcaggagacttgggccagaagtttgacccctcctgctgattct
agtggtggaaacaaaagaccagcagatagatgtgagttttattctacaggttggtgcatc
aatgggggctcgtgtaggttccttcacgtaagggaacctgtaattagccgtaataaggat
ggttttttggatactgcaaagatgaaaaacaaactcataaatggtgaaggttcaaaagat
accaccgagagatcagcaccggattgtttctctgatttgtcatcgtctgaagtccaatgt
agagaaaatcaaaggttgaatagtgacaattatttacatatgcataaggacgaggatcgg
tcaagcatgccgtttagagacattggaagagagactcttggatataaatcacacttggct
ggttatggcagctcttcacaaccattacctaaagctgattctcttagtaaagatagctat
tgtagtgaaatgcctccaagtagttcagtactgtcatcttacaagtatctgaacaccgaa
gttccctcttatgcctcagctttggatgacacaagttataagaggacccaccttatgccc
gactatcatcattttccaatcttgaatcgctctgtggataggtggccttctaatcttact
tcttcctcttcaaacctagatcctgttggtaatcacaagcttttagactgtagccgagaa
tactgttattctaggtcaatgtctctgcataacaagtcttcagcacttcctggttgtgga
actgaatctttttcttggactgatttatcaggggacatggaacactcatgtggttataag
accaaggtgtattttaatgactgggagaattccgtgccttttcggccatcaacctttctt
agtcaaattattccccctccagaaagcctttatgatccgattcgggacagcattgagcaa
accagcacagccgagaaagatttgtctgctaatgaaagaaaaacaactgatagagctata
gcccatcaagaaaacatgaatacctcttcaaaagaagaaaaacactcacccagaggccaa
aagaggaaacaatcaaaattagagaacctcggacccagctgtgaaattgataccgacttt
aggagagatggatcagtgaactatgagtcaggtgttatgaaacatttccgtgctgctctt
gtggacttcattaaagaattgcttaagccaacttggcatgaaggtcttttgatgaaggat
gcatacaagatgattgttaagaaagcagtagataagatcattaactctttgacacccgat
caagttcctgataccactgaatccatcaatcagtatctctctgtatctaagccaaaagta
gctaagctcattgaggggtatgtggagaaatatggtaaatcttga
DBGET
integrated database retrieval system