Solanum dulcamara (climbing nightshade): 129876174
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Entry
129876174 CDS
T09577
Name
(RefSeq) probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial isoform X1
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00540
Lipopolysaccharide biosynthesis
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
129876174
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sdul01005
]
129876174
Enzymes [BR:
sdul01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
129876174
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
129876174
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
129876174
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
129876174
Lipopolysaccharide biosynthesis proteins [BR:
sdul01005
]
Lipid A
129876174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-GeneID:
129876174
NCBI-ProteinID:
XP_055807495
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All DBs
Position
12:5162425..5171845
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AA seq
446 aa
AA seq
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MAMERGELIYKIYRALTYGLSPLIQLHLRWRKFRGLEHPLRWRERLGLPSLSRPPGPLFW
FHAVSLGEGMCAIPVIKSCIERRPDVTVLMTTTTKSAFEVIKHQLPNNVIYQFSPVDTPG
AIDAFLRYWKPSAIMLMESELWPNLIIGAAKNRIALALLNARISAKSYDSWSQPLVNSLT
SLMLSKFLLILPLSTTQAIRFQLLQCPPFVINFCGDLKYAVGNIDTNEEDQRALKELQVQ
LMDRKVWMASSIHKGEEKVMLGVHNALKQIHPDIITIIVPRHPQHGEQIALELEKAGVRV
ALRSRHDKLMPGTNIYVVDTLGELQKFYRLTPIAVIGGSFLPGLAGHNISEAAAAGCAIL
TGPYIGHFSHMATQMQRSNPLSVLQVSGHILVEALSNLLSDAKLLEKRQEAAKQAYHALS
CGITEKVWSLLDFHIFRIALANQDCT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagagaggtgagctgatttacaaaatttatagagccctaacgtatggatta
tcgccgctgattcagcttcacctccggtggcgcaaattccgcggcttggaacatcctctc
cgctggcgcgagcgtctcggactcccttctctctctcgcccccctggccctctcttctgg
ttccacgctgtctcccttggtgaaggaatgtgtgcgattcctgttatcaaaagctgcata
gagaggaggcctgatgtaactgttttgatgaccacaaccaccaagtcagcatttgaggta
ataaagcaccagcttccaaataatgtcatttatcagttttctccagttgacactcctggc
gccattgatgctttccttcgttattggaaaccaagtgcaatcatgttaatggaaagtgaa
ctctggccaaacctgattataggtgctgcaaaaaataggattgcacttgcattgcttaat
gctcgaatatctgcaaaatcttatgacagttggtctcagccattagttaattctctgaca
tcattaatgctctctaaattcttgctgattcttccactgagcactacccaggcaattcgc
tttcaactgctgcagtgtccacccttcgtcataaatttttgcggtgacctaaagtatgcc
gtagggaacattgacacaaatgaagaggatcaaagagcgctgaaagagttacaggtacag
cttatggacagaaaggtttggatggcatcttctattcataagggtgaagaaaaagttatg
ttaggagtacacaacgcactaaagcaaatacatccggatatcattaccatcattgtgccc
aggcatcctcagcatggagaacaaattgctttggaattggagaaagcaggagtaagggta
gcattacggtcacgtcatgataagctcatgccagggacaaacatatatgtggttgacaca
ttaggtgaattacaaaagttttacagactaacaccaatagctgtgattggaggttcattt
ctaccaggtttagctggtcataatatttcagaagccgctgcagcaggctgtgctattttg
actggtccttatatcggtcatttctctcatatggcgacacagatgcagcgctcgaatcct
ttgtcagtattacaggtttctggacacattcttgttgaagctctcagcaaccttcttagt
gatgcaaaacttttggaaaaacgtcaagaagctgctaagcaagcttatcatgctctgtct
tgtgggatcacagaaaaagtttggagccttctagacttccacatttttcggattgcactg
gcaaaccaagattgtacttag
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