Solanum dulcamara (climbing nightshade): 129876180
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Entry
129876180 CDS
T09577
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E
KO
K03250
translation initiation factor 3 subunit E
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sdul03012
]
129876180
03051 Proteasome [BR:
sdul03051
]
129876180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129876180
Translation factors [BR:
sdul03012
]
Eukaryotic type
Initiation factors
eIF-3
129876180
Proteasome [BR:
sdul03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
129876180
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129876180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
EIF3E_C
RPN7
TPR_9
TPR_19
TPR_20
COG6_N
Mce4_CUP1
TPR_14
Motif
Other DBs
NCBI-GeneID:
129876180
NCBI-ProteinID:
XP_055807504
LinkDB
All DBs
Position
12:complement(2198327..2202752)
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AA seq
438 aa
AA seq
DB search
MAAKYDLTPRVAPQLDRHLVFPLLEFLQERTLYPDEDILKAKIELLNNTNMVDYAMDIHK
SLYHTDDVPQEMMERRAEVVARLKALEEAAAPLITFLQNSSAVQELRADKQHNLQLLQER
YQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSDRSVSALWGKLAAEILMQN
WDIALEELNRLKEIIDSKSFSTPLNQVQNRIWLMHWSLFIFFNHENGRTQIVDLFNQDKY
LNAIQTSAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQYSCKDPITEFLACIYVNYDF
DGAQEKMKECEELILNDPFLGKRAEEGSFSSVPLRDEFLENARLFISETYCRIHQRIDMG
VLAEKLNLNYEEAERWVVNLIRTSKLDAKIDTETGTVIMEPNQPNVYEQLIDHTKALSGR
TYKLVSQLLEHAQTQAAR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaagtacgacctgacgccacgtgtagcgccgcaattggacaggcatttggtg
ttcccgttactggagtttttgcaagagaggacactgtacccagatgaagatatactcaag
gccaagattgagcttcttaataacaccaacatggttgattatgctatggatattcataag
tccctctatcacaccgacgatgtacctcaagaaatgatggagaggagagctgaggttgtg
gcaaggttgaaagcacttgaggaagctgcagcccctttgattactttcttgcagaattcc
agtgctgtccaggagttgagagctgacaaacagcacaatcttcagttgctccaagagagg
taccagattggtccagaccagatagaggcattgtatcaatatgccaaatttcagtttgaa
tgtggaaactactctggtgctgctgattatctttaccagtaccgagccttgtgtacaaac
agtgataggagcgtcagtgcattgtggggaaagcttgcggcggagatattaatgcagaat
tgggatattgcactggaggaactcaaccgcttgaaggaaattatcgactcaaagagtttc
tctactccgttgaatcaagttcagaatagaatatggctaatgcattggagtctattcatc
ttcttcaaccatgaaaatggcagaacacagatcgttgacctatttaaccaggacaaatac
ttgaatgccattcaaacaagtgctccccacttgctgcgatacttggcgaccgcatttatt
gtcaacaagcggagaagacctcaatttaaggactttataaaggttattcagcaggagcaa
tactcttgcaaagatcccatcacagagtttttggcatgtatttacgtcaactatgatttt
gatggagcacaggaaaagatgaaggagtgcgaagagttaatattgaatgatcctttcctt
ggaaaaagagctgaagagggaagtttctcttctgtgccattgagggatgaattccttgaa
aatgctcgcctttttatctccgagacctactgccgtattcaccaacgcattgacatgggg
gttctagctgagaagctaaacttgaactatgaggaggcagagcgatgggtagtgaatctt
attaggacctcaaagcttgatgctaagatcgacacggagaccgggacagttataatggaa
ccaaatcagccgaatgtgtatgagcagctcatcgatcacaccaaggccctttctggacgc
acttacaaattagtcagccagcttcttgaacatgcacaaacgcaggctgctcgatag
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