Solanum dulcamara (climbing nightshade): 129876245
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Entry
129876245 CDS
T09577
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129876245
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
129876245
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
DER1
CUE
UBA_RAD5A
UBA_4
Motif
Other DBs
NCBI-GeneID:
129876245
NCBI-ProteinID:
XP_055807596
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Position
12:3093393..3105242
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AA seq
293 aa
AA seq
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MNVGPSGFNNAPVTKALVIACTLFTIIFGVRGRGNQLGWSYQDIFQKLQIWKLVISAFTF
SSTPELVFGLYLLYYFRVFERQIGSNKYSVFLLFSFVVSLLLEVLALQLIKDPSLSILSG
PYGLIFSSFVPFYLDIPVSTRFRIFSLHFSDKTFIYLAGLQLLFSSWKRSIVPGLCGIIA
GCLYRLNFFRIRRVKFPEFFTSFFARLSWPSMGNSPPPSAPARNAPGSVPIFAGHQMEGS
YPAPVSSTPEPPEDAIAMLVSMGFDRNSARQALNHSRNDVNIATNVLLESQSH
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcggaccatctggtttcaacaatgcaccagtaacaaaggcattggtaattgcg
tgtaccctcttcaccattatatttggtgtccgtggccgtggaaatcagctgggatggtct
tatcaggatatcttccagaagcttcaaatctggaagctggtcatatcggcttttaccttt
tcttctacccctgaactagtatttggattatatctgctgtactacttccgcgtcttcgag
aggcaaatcggttcgaacaaatattctgttttcctgctgttctcttttgtggtctcttta
ttgcttgaggttcttgctctacaacttattaaagatccttccttgagtatcctgtctggg
ccctatggactaattttttcttcctttgtgcccttttatctcgacattcccgtttctacc
cggtttcgcatatttagtctgcacttctctgacaagacttttatttacttagctggtctc
cagcttcttttctcatcctggaaaagatctattgtacctgggctctgtggaataattgca
ggttgcttgtatcgtttgaactttttccgtattaggagggtgaagttcccagaatttttt
acatccttctttgctcgactttcttggccatcgatgggtaactcgccaccaccttcagca
ccagcaagaaatgctccaggaagtgtaccaatctttgcaggtcaccaaatggaggggagt
tacccagctccagtttcatccaccccagagccacccgaagatgctattgctatgctggtg
tcgatgggctttgataggaactcagcaaggcaggcactcaaccattcaagaaatgatgta
aatatagccacaaacgtcctccttgagtctcaatctcactga
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