Solanum dulcamara (climbing nightshade): 129876246
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Entry
129876246 CDS
T09577
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129876246
Spliceosome [BR:
sdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129876246
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
DUF3587
Motif
Other DBs
NCBI-GeneID:
129876246
NCBI-ProteinID:
XP_055807597
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All DBs
Position
12:complement(2932934..2941347)
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AA seq
444 aa
AA seq
DB search
MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIAAAVNAIQF
YSNFQPSIRGRNVYVQFSSHQELTTVDQNAQGRGDEPNRILLVSIHHVLYPITVEVLHQV
FSPHGIVEKIVTFQKSAGFQALIQYQLPQTAISARNSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDYTNPNLPSEQKGKSPQQGYGDAGAMYSLQGSGPRGVGFPQMGNAAAIAA
AFPSGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
MGDGFQAELAVHFLKGAMLFGQRLEVNYSKHPNIITGPETRDYSNSNLNRFNRNAAKNYR
YCCSPTKMIHLSSLPQDMTEEEIVAHLEEHGPIVNTKLFEMNGKKQALVLFDNEEQATEA
LVCQHATSLGGSIIRISFSQVQSI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccgtcaaaggtcattcatgttcgcaacgtaggccacgaaatctcagagaat
gacttgcttcagctatttcagccctttggagtcattaccaaacttgtaatgctaagggca
aaaaatcaggcccttttgcaaatgcaagacattgctgcagctgtaaatgccatacaattc
tattcaaattttcagcccagcataagggggagaaatgtttatgtacaattttcatctcat
caagaactgacaaccgtggatcagaatgcacaagggcgaggagatgagcctaatcgaatt
ctcttagtttcgatacatcacgtgctatatcctataactgtggaagtgctgcatcaagtt
ttttcacctcacggaattgttgagaagatcgtgacgtttcagaagtcggccggttttcaa
gctttaattcagtaccaattaccccagactgctatttctgctaggaactctctccagggg
cgtaatatatatgatggctgctgtcagcttgacatacaattctcaaacctggatgaattg
caagtgaactacaataatgaacgctcgagggactacaccaacccaaatctaccatcagaa
cagaagggcaaatctcctcaacaaggatatggagatgcaggagccatgtactcattgcaa
ggttctgggcctcgtggagttggatttcctcagatgggaaatgctgcagctattgcagct
gcctttcctagcggtttgccccctggcataagcgggacaaatgacaggtgtactgttctt
gtatctaatttaaatccagatagaatagacgaggacaagctttttaatctgttctccatt
tatggaaacattgttagaattaaactcttacggaataaaccggatcatgctctggttcaa
atgggtgatggcttccaggcagagctggctgtgcactttttgaagggtgccatgttattt
ggccagcggttggaagtcaactattcaaagcacccaaatattattaccggaccagagaca
cgcgactactcgaactcaaatctcaatcgttttaaccggaatgctgctaaaaactacagg
tattgttgctctcctaccaagatgatccatctatcaagcctgccacaggatatgacggaa
gaagagatagtggctcatttggaggagcatggtcccattgtgaacacaaagcttttcgaa
atgaatgggaagaagcaggctcttgttcttttcgataacgaggagcaggcaactgaggca
ctggtgtgtcaacatgctacatcccttggcggatcgatcattcggatttcgttttctcag
gtacaaagtatctga
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