Solanum dulcamara (climbing nightshade): 129876248
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Entry
129876248 CDS
T09577
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00541
Biosynthesis of various nucleotide sugars
sdul01100
Metabolic pathways
sdul01250
Biosynthesis of nucleotide sugars
Module
sdul_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
129876248
Enzymes [BR:
sdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
129876248
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
NmrA
Motif
Other DBs
NCBI-GeneID:
129876248
NCBI-ProteinID:
XP_055807598
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Position
12:65707566..65711224
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AA seq
674 aa
AA seq
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MSTYTPKNILITGAAGFIACHVANRLVRSYPDYKIVVLDKLDYCSNLKNLIPSQSSPNFK
FVKGDIASADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGCNVRSYLYCEDVAEAFEVVLH
KGEVGHVYNIGTTKERRVIDVAQDICKLFNIDQDKNIQFVENRPFNDQRYFLDDQKLKNL
GWSETTMWEEGLKKTIDWYKNNPDWWGDVSGALLPHPRMLMMPGGIERNLDGAEKYDSGS
TKFSGKSNEAQTVAPASKTSNIPQKSPYKFLIYGRTGWIGGVLGKLCEKQGIPYEYGRGR
LEDRSKLLADIKAVKPTHVFNAAGVTGRPNVDWCESHKPETIRTNVAGTLNLADVCREHG
LLMMNFATGCIFEYDAAHPEGSGIGFKEEDTPNFAGSFYSKTKAMVEDLLKNYDNVCTLR
VRMPISSDLSNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLKGIWNFTNPG
VVSHNEILEMYKKYIDPAFTYANFTVEEQAKVIVAARSNNEMDASKLKKEFPELLSIKES
LIKCVFEPNKKTSA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatacacccctaagaacatactcattactggagctgccggatttattgcatgt
catgtagccaacaggcttgtccggagctaccccgattacaagattgttgtccttgacaaa
cttgattattgttcaaatttgaagaaccttattccttcccaatcttcccctaacttcaag
tttgttaagggagacattgctagtgcagatcttgtgaactaccttctcatcactgagtcc
attgacactataatgcactttgctgctcagactcatgttgataactcctttggtaatagc
tttgagttcactaagaacaacatctatggtacccatgtactattagaggcctgcaaagtt
actggtcagatcagaaggtttatccatgtgagtacggatgaggtttacggggagactgat
gaggatgctgttgtaggaaaccatgaagcctcacaactccttcctactaacccatattct
gccacaaaagctggggctgaaatgcttgttatggcttatggtagatcatatgggttacct
gttataaccactagagggaacaatgtctatggtcctaaccaatttcctgagaaactaatc
ccaaagtttatacttttagccatgaggggaaagcctcttcctattcatggtgatggttgt
aacgttcgtagttatctctattgtgaggatgttgctgaggcttttgaagtcgttctacac
aagggagaggtcggtcatgtttataacattggaactacaaaagagagaagagtgattgat
gttgcccaagatatatgcaaactctttaacatagatcaagacaaaaacattcagtttgtg
gagaacaggccgtttaatgaccaaaggtactttctggatgatcagaagttgaagaacttg
ggatggtcagagacgaccatgtgggaagagggtctgaaaaagactattgattggtataag
aataaccctgattggtggggggatgtctcgggagcattgcttccccatcctagaatgctg
atgatgcctggtgggatagaaagaaatttggatggagctgagaaatatgattcaggatct
accaaattctcagggaagtccaatgaagcccaaacagtagctccagcttcaaagaccagc
aacattcctcagaaatccccttataagttcttgatctatggtaggactgggtggattggc
ggtgtgctagggaaattgtgtgagaaacagggaattccgtatgagtatggcaggggacgt
ttggaagatcgctcaaagcttttggcagatattaaagctgtcaaacccacacatgtattc
aatgctgcgggcgtcaccggtagacccaatgttgattggtgtgagagtcataaaccagaa
acaattcgtacaaatgttgctggtactctaaacttggcagatgtttgcagagagcatggc
ctcctgatgatgaacttcgcgactggttgcatatttgagtatgatgctgcacatccagaa
ggttccggtattgggttcaaagaggaagacacacccaattttgctggttctttctattca
aagaccaaggccatggtagaagatctgttgaaaaattatgacaacgtttgcacactcaga
gttcgcatgccaatatcttcagatctcagcaaccctcgcaatttcattaccaagattagc
cgctacaataaggtggtcaatattcctaacagtatgaccatattggatgagcttcttccg
atttcaattgagatggcgaagcgtaacctcaagggcatatggaatttcacaaaccctggc
gttgtgagtcataatgagatcttggaaatgtacaagaaatatatcgatccagcatttact
tatgccaacttcacagtggaagagcaggccaaggtaatcgttgcagctcgtagtaacaac
gagatggatgcatcaaagttgaagaaagagttccctgagttgctatcaatcaaagagtca
ctgatcaagtgtgtttttgaaccaaacaagaaaacctctgcataa
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