Solanum dulcamara (climbing nightshade): 129876307
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Entry
129876307 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129876307 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129876307
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129876307
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_8
TPR_11
TPR_BSK1_C
TPR_12
TPR_16
ARM_TT21_C
Coatomer_E
DUF7143
Motif
Other DBs
NCBI-GeneID:
129876307
NCBI-ProteinID:
XP_055807682
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Position
12:complement(36462840..36487669)
Genome browser
AA seq
496 aa
AA seq
DB search
MVHGYGTHFLLRRPRMEISTEPLSLEHRIWCGSLHSMVCRFHWQFLADQDMQGLLNNLQD
WELSLKGKDKKMKSQARPKEMLREDWSRTNELLTSPQVSGTQRVGKSTSIGSDAGPYNYS
KNYNPISHLSSELISEEGNVNANSEKELGNEFFKQKKFNEAIDCYSRSIALSPTAVGYAN
RAMAFLKIKRFQEAENDCTEALNLDDRYIKAYSRRSTSRKELGKLKESIKDAEFALRLEP
QNPEIKKQYGEVKALYEKEILKRVSGATGVFAQGAQKSGKTIKSGPVIQSVSSSSQKENN
RDVPGTAIEVEDTHMQINNKDSDASPIGPTLNPAFWTAKHNHKISKQELEESVQDLAARA
AGLAKSEAAKNIAAPNSAYQFEVSWRGLSGDRNLQTHLLKVTSPATLPRIFKNALSAPML
MDIVRCVATFFIGDMNLAIRYLEDLTKVPRFDIIIMCLSSTDKSELLKMWEEVFCKGAEE
QSATLGALRFKYGLKE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatggttatgggacccactttttattgagacgacctcgtatggaaatttcaacg
gagccattgagtctggaacatcgaatttggtgcggatcattacattctatggtttgccgg
tttcattggcaatttttggctgaccaggacatgcaggggctcttgaataacttgcaagat
tgggaactatcattgaagggtaaagataaaaagatgaaatcgcaggctcgtcccaaagag
atgttgagagaagactggagtcgtactaatgaacttcttactagtcctcaagttagtggg
acacaacgagttggcaaatctacctcgatcggaagtgatgctggtccatataattattct
aaaaattacaatccaattagccatctatcaagtgaactgatatcagaagagggcaacgtc
aacgccaattcagagaaagagctgggtaatgagttctttaagcagaaaaagttcaatgaa
gccattgattgctattctagaagcattgcactttcaccaactgcagtaggttatgccaat
agagcgatggcttttcttaaaatcaaaaggtttcaagaggcagagaatgactgcacagaa
gccttgaatctggatgatcgctacattaaagcttattctcgccgttcaacttctcggaaa
gaacttgggaaattgaaagaatcaattaaagatgctgaatttgcgttgaggttggaacca
cagaacccagagatcaagaagcagtatggagaagttaaggctctgtatgagaaggagatt
cttaaaagagtatcgggagcaacaggagtgtttgctcaaggggctcaaaaatctggaaag
acaattaaatctggccctgtaatccaatctgtatcaagtagttctcaaaaggaaaacaat
agagatgttcctgggactgctattgaggttgaagatactcatatgcagattaacaacaaa
gattcagatgcttctccgatcggtcctactctgaatcctgctttttggactgcaaagcat
aatcacaaaattagcaagcaagaactcgaggaatctgtccaagatcttgctgctcgagct
gctggtcttgccaagtctgaagctgcaaaaaatattgcagcaccaaattcagcctatcag
tttgaggtttcttggcggggactttctggtgatcgtaatctgcaaactcatttattgaag
gtcacttcacctgcaacgttaccccgaatatttaaaaatgcactatctgctccgatgctc
atggacattgtaagatgtgttgcaacatttttcattggagatatgaatttggccattaga
tacctggaagatctgacaaaggtcccaaggttcgacattatcatcatgtgcctttcatcc
acagataaatctgaacttctcaagatgtgggaagaggtcttctgtaagggagccgaggag
caatctgctacacttggtgcacttcgcttcaagtatggcctaaaagaatga
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