Solanum dulcamara (climbing nightshade): 129876337
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Entry
129876337 CDS
T09577
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129876337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129876337
Membrane trafficking [BR:
sdul04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129876337
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_8
TPR_19
TPR_14
CFAP70_TPR_C
TPR_7
TPR_9
TPR_12
RMD1-3
PPTA
TPR_20
CFAP70_mid_TPR
CABIN1_N
NGF
Motif
Other DBs
NCBI-GeneID:
129876337
NCBI-ProteinID:
XP_055807722
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All DBs
Position
12:67386691..67398302
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AA seq
744 aa
AA seq
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MAMRDLVTGAPSCGEPSSSSNPLGALANALIGSSSKTQERLKEIPTSVSTSSNGNFLAGV
EEPLVSLPGSEFEHPLQPNIQGSQFLQGFRSADQNRLADAWDEIQRPQLPFAHGSQNVTN
IPLEHARLLPDLNGPPQQVLSSFLHSFVNSSHGGVPFRPASLPLLGLSEGDKQCIRDRST
IMARHFFADKSEDFINGQVNALLSSLEIDNHVRARGPVPGRYPELEEYWNESLAMKPAPH
VADGWINEFAQNRVGHADPNAWVQSFEQQHGANGWASEFEHEQSQLGMVGQMRGANIPNL
AAMEQTRMLAHTLAQNNDPKFQNSKFLQFVSKMSRGEISIEENQFKPATISSGDWAAEYE
QQHNGGQAWADQFAHEELSRGPQGWVNEFSAEREQHGSVNDEWVSEFSKLNVNDDWADEF
GRQVAEGAFGETSADGWAEAYDEYMNEQSALKQQSDASRGVYVFSDLNPYVGHPNPLKEG
QELFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQKADPAN
LEVLLSLGVSHTNELEQQAALKYLYSWLRHHPKYGSIAPQEQPVSFYHADVARLFTDAAQ
MAPDDADVHIVLGVLYNLSREYDKAIESFKTALKLKPRDYSLWNKLGATQANSVQSSDAI
LAYQQALDIKPNYVRAWANMGISYANQGMYEDSIRYYVRALAMNPKADNAWQYLRISLSC
ASRNDMLEACDSRNLDVLQKEFPL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagagacttggtcaccggtgctcccagttgtggcgaaccttcttcttcttct
aatccacttggtgctctcgctaacgcactcatcggctcttcatctaagactcaggaaagg
ctaaaagagatccctacatcagtaagtacatcgtccaatggcaacttccttgcgggtgtt
gaagaaccacttgtctcacttccaggatcagagtttgaacatccacttcagccgaatatt
cagggttcccaattccttcaagggtttcgttctgcagatcaaaataggctcgctgatgct
tgggatgagatacaaaggcctcaacttccttttgctcatggaagtcagaacgtgacaaac
atccctttggagcatgcccggcttctaccagatttgaatgggcctccacaacaagtattg
tcaagctttctgcactcgtttgtcaacagtagtcatggtggcgttccgtttcgtcctgct
tcactgccattattgggtttatcagaaggtgacaagcaatgcatacgggaccgtagcacg
atcatggcccggcatttttttgctgataaaagtgaagacttcataaatggacaggttaat
gctctattgtcttctttagaaattgataatcatgttagggcaaggggccctgtgcctgga
agatatcccgagcttgaggagtactggaatgagtcattagctatgaaacctgcgcctcat
gttgcagatggatggattaatgagtttgcacagaaccgagtaggacatgctgacccaaat
gcttgggtccaatcatttgaacaacaacatggtgctaatggctgggcatctgaatttgag
catgaacaatcccaacttggaatggttggtcaaatgagaggtgcaaatattcccaaccta
gcagccatggaacaaacacgtatgttggcccacacattagctcaaaacaatgacccaaaa
tttcagaattccaaatttctccaatttgtatccaagatgagtcgtggtgaaatttctatt
gaagaaaatcaattcaagcctgctacaatttcttctggggattgggcagcagaatatgaa
cagcagcataatggaggtcaagcatgggctgaccagtttgcacacgaggagctttctcgt
ggaccacaagggtgggtgaatgagttttccgctgaacgtgagcagcatggatctgtaaat
gatgagtgggtaagtgaattttcaaagttgaatgtgaatgatgattgggcagatgaattt
gggcgtcaagttgccgaaggagcgtttggtgaaacctctgctgatggctgggcagaggct
tatgatgagtatatgaacgagcaatctgctctcaagcagcaatcagacgcatcaagggga
gtttatgtgttctctgatctgaacccttatgttggtcatcctaaccctctaaaagaaggg
caagaattgttccgtaagggtctcttaagtgaagcagttcttgctttggaggctgaagtc
ttgaagaaccctgaaaatgctgagggttggaggttacttggcatagcacatgctgaaaac
gatgatgatcagcaggctatagctgctatgatgcgggcacagaaggctgatcccgcaaat
ctggaagttcttctctcccttggagtaagtcatacaaatgaactggagcaacaagctgca
ttgaagtatttgtatagttggttacgccaccacccaaagtatgggagtatcgcccctcag
gagcagcccgtttctttctatcatgctgatgtagctagattgtttacagatgcagctcaa
atggcacctgacgatgctgatgtacacatagtacttggggtgttatacaatctatcaaga
gaatatgacaaagctatagagtcttttaagacagcattaaagctcaaacctagggactac
tcactctggaataagcttggtgcaacacaagctaacagtgtgcagagttctgatgcaata
ttggcttatcagcaggcgctagatataaagcctaactatgtacgtgcatgggcaaacatg
ggcatcagttatgccaaccagggtatgtatgaggattccatccgttattatgtccgggca
ctagcaatgaatcccaaggcagacaacgcctggcaatatttgagaatatctctgagctgt
gcatctcgaaatgatatgttggaggcatgtgactcgcggaatcttgatgttcttcagaag
gagttccctctgtga
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