Solanum dulcamara (climbing nightshade): 129876356
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Entry
129876356 CDS
T09577
Name
(RefSeq) transcription initiation factor IIB-2-like isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129876356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129876356
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
129876356
Prokaryotic type
Archaeal type
TFB
129876356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
A2L_zn_ribbon
DUF7573
Zn_ribbon_8
PP1
Motif
Other DBs
NCBI-GeneID:
129876356
NCBI-ProteinID:
XP_055807746
LinkDB
All DBs
Position
12:complement(2276617..2281984)
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AA seq
312 aa
AA seq
DB search
MGDSYCSDCKRNTEVVFDHAAGDTVCSECGLVLESRSIDETSEWRTFADESGDHDPNRVG
GPVNPLLGDVGLSTVISKGPNGSNGDSSLARLQNRGGDPERALVMAFKVIANMADRLSLV
STIKDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKARTVKEICSIANGATKKE
IGRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNIGMNHEEIKAVQETVKKAEEFDI
RRSPISIAAAIIYMLTQLTDSKKPLRDISIATTVAEGTIKNAYKDLYPHASKIIPEWYLK
DKDIKSLCSPKA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactcatactgttcggactgcaaacggaatacggaggtggtgtttgaccatgcc
gccggtgatacagtttgttcggagtgtgggcttgtgctggaatcgaggtcaattgatgag
acttctgagtggcgtacgtttgctgatgaatccggtgatcatgacccgaaccgtgttgga
ggacccgttaacccgttgcttggtgatgtcggtctttctactgtaatttctaaaggtcct
aatgggagtaatggagattcatctctagctaggttgcagaatcgaggtggtgatcctgaa
cgtgccctagttatggcttttaaggttattgctaatatggctgataggctgagccttgtt
tctaccataaaggaccgagcaagtgagatatacaaaaggctggaagaccagaagtgtacg
agaggaaggaatctggatgccttggtggctgcttgtatttacattgcgtgtcggcaagaa
ggcaaagcacgcactgtaaaagaaatatgctcaatcgccaatggagctacaaagaaggaa
attggccgagcaaaagagttcattgtgaaacagttgaaggttgaaatgggagaatctatg
gagatggggactatacatgctggagactatctgagacgtttctgttctaacattggaatg
aaccatgaagagattaaggctgtccaggaaactgtcaagaaggcagaagagtttgatata
aggaggagtcctatatcaattgctgcagcaataatatacatgctaacccagcttacagat
tcaaagaaacccctgcgagatatctcaattgcaaccacagttgcagaagggactataaag
aatgcatacaaggatctctatccacatgcttccaaaattatacctgaatggtatctcaag
gataaggacattaaaagcctctgtagtcccaaggcgtag
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