Solanum dulcamara (climbing nightshade): 129876732
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Entry
129876732 CDS
T09577
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129876732
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129876732
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129876732
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129876732
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129876732
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129876732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
UCH_1
MATH
RA
Motif
Other DBs
NCBI-GeneID:
129876732
NCBI-ProteinID:
XP_055808203
LinkDB
All DBs
Position
12:complement(3938716..3971570)
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AA seq
1148 aa
AA seq
DB search
MTMLNPQPLDQQEDEEMLVPHSDLVEGPQPLVEGPQPMEVAPPENATTGENQAVDEPQAS
RFTWTIDEFSRLSVKKLYSEPFVVGSYKWRVLIFPKGNNVECLSMYLDVADSSTLPYGWN
RYAQFSLTVVNQINPKYSVKKETQHQFNQRESDWGFTSFMLLSDLYDPNKGYLVNDKVVI
EADVAVRKVIDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN
DMPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED
KMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCRDVYASFDKYVE
VERLEGDNKYHAEAHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL
ELDLDRENGKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER
VTKEDNKRALEEQYGGEEEVYISNSIPKLCLAVSYFDSYLLLLLQLPQTNPGFNNTPFKF
TKYSNAYMLVYIRESDKDKIICDVGEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTII
KVARDEDLREQIGKEIYFDLVDHDKVRSFRIQKQMPFNLFKEEVAKELGIPVQFQRFWIW
AKRQNHTYRPNRPLTPQEELQTVGQLREVSNKTNNAELKLFLEVECGLDLIPGPPPDKSK
DDILLFFKLYDPEKEEPRYVGRLFVKSTSKPIEILPKLNELAGFAPDQEIELFEEIKFEP
SVMCERLDRKASFRFSQIEDGDIICFQKKASPEVEEQVRFPDVPSYMEYVKNRQIVHFRA
LEKPKEDDFCLELAKSDTYDEVVERVAQRLGVDDPSKIRLTPHNCYSQQPKPNPIKYRSV
DNLVDMLIHYNQISDILYYEVLDIPLPELQCLKTLKVAFHHSTKDEIEILNVRLPKQSTV
GDVLNEIKSKVELSHPNAELRLLEVFYHKIYKIFPLSEKIENINDQYWTLRAEEIPEEEK
NLGPHDRLIHVYHFTKETPQNQMQVQNFGEPFFLVIHEGETLAEIKVRIQKKLQVSDEEF
SKWKFAFLALGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHADNTSKRPYVNQNRHTF
EKPVKIYN
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctgaatcctcaaccgttggatcagcaggaagacgaggagatgcttgtacca
cattctgacttagtagaaggtcctcagcctttagtcgaaggacctcagccaatggaagtg
gctcctcctgagaatgctactacaggggagaaccaagctgtggacgagccgcaggcttcc
cggtttacctggacaattgacgagttctctcggttatctgtgaagaagctatattctgag
ccttttgttgttggtagttataaatggagagtgcttatatttccaaaaggaaacaacgtg
gaatgtttgtcaatgtatttagatgtggcagattcatctacattgccatatgggtggaac
agatatgctcagttcagcttaacagttgtaaatcaaataaaccccaaatattcagtgaaa
aaagagacgcagcaccagtttaaccaaagagagagtgattggggcttcacatcattcatg
cttctaagtgatctttatgaccccaataagggatatctcgtaaatgataaagttgttatt
gaagctgatgttgctgtacggaaggtcattgattactggacatatgactcgaagaaagaa
acgggatatgttgggcttaagaatcagggagctacttgttacatgaactctctcctacaa
accttgtaccatatcccctactttagaaaggctgtgtatcatatgccaaccacagagaat
gacatgccatcagggagtattccattggctctgcaaagtttattttataagctccaatat
agtgataccagtgtggcgacaaaagaattgacaaaatcttttggatgggacacttatgat
tcattcatgcagcatgacgtgcaagaactaaacagagtgttgtgtgaaaagcttgaagac
aagatgaagggtacggttgtggaagggacaattcagaagttatttgaggggcaccatatg
aattacatagaatgtattaatgtggacttcaaatcaacgagaaaagagtcattttatgat
cttcagctcgatgtgaaaggctgccgcgatgtttatgcttcttttgacaagtatgttgaa
gtcgaacgtctagaaggcgataataagtaccatgctgaagcacatggtttgcaggatgca
aaaaagggtgtactatttattgacttccctccagttcttcagcttcagttaaagaggttt
gaatatgatttcatgcgagatactatggttaagataaacgaccgctatgaatttcctcta
gagcttgaccttgatagggagaacggaaaatatttgtctcctgatgcagataagagtgta
cggaatctctatacacttcatagtgtgttggttcatagcggcggtgtgcatggtggacat
tattatgctttcatcaggccaacactgtcagatcaatggtataagtttgatgatgaacgg
gtgacaaaagaagacaacaagagggctctagaggaacaatatggtggagaggaggaggta
tacatctctaacagcatacctaaattgtgtcttgctgtgtcatactttgactcttactta
cttttgcttttacagttgccacagacaaatcctggcttcaataacactcccttcaagttt
acaaagtactccaatgcttacatgcttgtttatatacgtgagagtgacaaggataaaata
atctgtgatgtcggtgagaaggacattgcggaacacctaaggataaggttgaagaaagaa
caagaagagaaggaggacaagagacgatacaaagcacaagcccacctttatacaatcatc
aaggttgcacgtgatgaggatcttagagaacagattggtaaggagatatattttgatctt
gttgatcatgacaaagttcgtagctttcgaatccagaaacagatgccttttaaccttttc
aaggaggaggttgcaaaagaattgggtatcccagttcaattccagcgtttctggatttgg
gcaaagcggcaaaatcacacttaccggcccaatcgcccattaactccgcaggaggaacta
caaacagttggtcagttaagggaagtttctaacaagaccaacaatgctgagttaaaatta
tttttggaagtggagtgtggcctggatctcattcctggtcctccacctgacaaaagtaaa
gatgatatactccttttctttaagctttatgatcctgaaaaagaagagccccgttatgtt
ggtaggcttttcgtgaagagtactagtaagccaattgagatacttccaaaacttaatgaa
ttggctggatttgctcctgaccaagaaatcgaactttttgaggaaataaaatttgaacct
tctgtcatgtgtgaaagactagacagaaaggcttcatttcgatttagccagattgaagat
ggggatattatatgttttcagaagaaagcttctcctgaagttgaagagcaagtccgattt
ccagatgttccttcatatatggaatacgtcaaaaatcgccagattgtccatttcagagcg
ctggaaaaaccgaaggaggatgatttctgtctggagttagcaaaaagtgatacatatgat
gaagtagtggagagagtggcgcagcggcttggtgtggatgatccctccaaaattaggctt
actcctcacaactgctactcgcagcaacccaagcccaaccctatcaaatatcggtctgtg
gataatttggtagacatgcttatccattacaatcagatctccgatattctgtattatgaa
gttctggacatacctctgccagaattacaatgtctgaagacgctcaaagttgccttccat
cattctacgaaggatgagattgaaattctgaatgtaagattgcctaagcagagtactgtg
ggggatgttcttaatgaaatcaaatcaaaggtagagttgtcccatccaaatgcagagctt
agattacttgaggtcttctatcacaagatttataagatctttccgctcagtgaaaagatt
gagaatataaatgaccaatattggacattgcgggcagaggaaataccagaagaggagaaa
aaccttggtcctcacgatcgtctaattcatgtttaccatttcacaaaagagactccacaa
aatcaaatgcaagtgcagaattttggagaacctttctttctggtcatccatgaaggtgaa
actttagcggaaattaaagtgcgcattcaaaagaaattgcaggtttcagatgaggagttt
tctaagtggaaatttgcatttttagcattggggcgcccagaataccttcaggactcagac
attgtatccagccgttttcagaggagagatgtttatggtgcttgggagcagtaccttgga
ttggagcatgcagataatacatctaagaggccatatgttaatcagaaccgtcacacattt
gaaaagccagtcaagatatacaactga
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integrated database retrieval system
