Solanum dulcamara (climbing nightshade): 129876776
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Entry
129876776 CDS
T09577
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00531
Glycosaminoglycan degradation
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
129876776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sdul00536
]
129876776
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
129876776
Glycosaminoglycan binding proteins [BR:
sdul00536
]
Heparan sulfate / Heparin
Enzymes
129876776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
129876776
NCBI-ProteinID:
XP_055808247
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All DBs
Position
12:7331298..7335404
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AA seq
539 aa
AA seq
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MASSLRCYLGLYLLLLSLYLNQISRADIIEEGILYIDGFSSIAKIDNEFICATLDWWPPS
KCDYGTCSWGNASLLNLDLSNKVFLNAIRAFSPLIIRLGGTLQDKLIYQTTHNEQPCTPF
LRNATELFGFTQGCLPLYRWDELNEFFKKTGAKVTFGLNTLNGKTIVPDGSIALGDWDSS
NAASLIRYTVSRGYTIHGWELGNELNGNGIGPGISADQYACDVMALYKLVEDIYKGKDIM
PLILAPGGIFDAVWFPKFMDKASNSLQVVTHHIYSVGGGNDTKLVQKILEPSHLDEESKI
LQNLQGVLRNSGTSAVAWVGESGGVYNSGRNHISNSFVSSFWYLDQLGMSATFDNKKYCR
QTLVGGNYGLLNTTNFHPNPDYYGALLWHRLMGRNVLSTRFQGMKKLRSYAHCSKSSEGI
ALMLINMHGSTTVNISLSVTLANTNESPMLLHVTNDQNPRHGIEREEYHLTAKDGELHSQ
TVLLNGKELNVDHFGRIPLLEPIRVNPSDPIVIAPLSIVFIHIPTIQVPACSMFTRENM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcgttgaggtgctacttggggttgtacttgttgctattgtccttgtacttg
aaccaaatttcaagagcagatattattgaagaagggattctttacattgatgggttttct
tcaattgcaaaaattgataatgaattcatttgtgcaaccttagattggtggcctcctagt
aaatgtgactatggaacttgtagctggggaaatgcttctcttcttaatcttgatctaagc
aacaaggtatttttgaatgcaatcagagcgttttctccattaataattaggcttggaggc
acattgcaagataaactaatataccaaacgacgcataatgaacaaccatgtactcctttt
ctccgtaatgctacagagttgtttggcttcacgcaaggttgcttgcctttgtatcgttgg
gatgaactcaacgaatttttcaagaaaacgggggcaaaagtaacttttgggttgaatact
ttaaatggaaagacaatagttcctgatggcagcattgctttgggagattgggattccagc
aatgcagcgtctttgattagatatacagtcagcaggggttatactatccacggctgggag
cttggaaatgaattgaatggaaacggaataggtccaggtatttcagccgaccagtatgct
tgtgatgttatggctctttacaaattagtggaagatatatataaagggaaggatattatg
ccattaatccttgcaccaggaggaatatttgatgctgtttggtttccgaaatttatggat
aaagcatccaattctcttcaagtagttacacatcacatttacagtgttggtggaggcaat
gacaccaaactagttcagaaaatacttgaaccttctcatctggatgaagagtccaaaata
ttgcaaaatcttcaaggcgttctccgaaattctggaacttcagccgtagcatgggttggt
gaaagtggaggagtttataacagtggtcgcaatcatatttcaaatagcttcgtgtccagc
ttttggtacttggatcagcttgggatgtcagccacgttcgataataagaaatattgtcga
caaaccttggttggtggaaactatggtctcctcaataccacaaactttcatccaaatcct
gattattatggtgctcttttatggcaccgtttgatgggaaggaatgttctatcaacacgg
ttccaaggaatgaaaaaactacgctcttatgctcactgttcaaaatcttccgaaggaatc
gcgctgatgttgatcaacatgcatggtagtacaactgttaatattagtctttcagtcaca
cttgctaacacaaacgagtcgccaatgctgctacatgtcacgaacgatcagaacccgaga
cacggaattgagagggaagaatatcaccttacagccaaagatggtgaattacatagccaa
actgtgcttttgaatggaaaggaacttaatgtagatcattttggaagaatccctctcttg
gaacctataagagtgaatccctctgatccaattgtcattgctcctctttcaattgtattt
attcatattcccaccattcaagtgcctgcttgtagtatgtttaccagagagaacatgtaa
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