Solanum dulcamara (climbing nightshade): 129876903
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Entry
129876903 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129876903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129876903
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129876903
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
129876903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FAIM1
zf-C3HC4_2
zf-RING_4
DUF7567
Motif
Other DBs
NCBI-GeneID:
129876903
NCBI-ProteinID:
XP_055808356
LinkDB
All DBs
Position
12:complement(61236875..61245943)
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AA seq
321 aa
AA seq
DB search
MESDSIECISSLDVDDIVHSQLFSSSKTPHNNNNKNNNSNNNSVIAIHPATSVHELLECP
VCTNSMYPPIHQCHNGHTICSTCKERVHNRCPTCRQELGDIRCLALEKVAESLELPCKYG
SLGCPEIFPYYSKQKHEAMCNFRPYNCPYAGSECSVVGDIPYLVAHLRDDHKVDMHSGCT
FNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGVAPVYMAFLRFMGDETDARN
YSYSLEVGGNGRKHIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
GKIWKEQQNPDGGASIPNLCS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagatagcattgaatgcatatcatctttagatgtggatgatattgtacattct
cagttgttctcttcttcaaagacaccccacaacaacaataacaaaaataataacagcaat
aacaacagtgtcattgcgattcatccagcaacaagtgtacatgaacttctggaatgccct
gtttgtactaattccatgtatcctccaatccatcagtgtcacaatgggcacaccatctgc
tcaacatgtaaagaaagggtacacaatcgatgtccgacgtgtagacaggagcttggtgat
attagatgcttagcactggaaaaggtggctgaatcacttgagctcccttgcaaatatggc
tctcttggttgtcctgagatatttccttattacagtaagcagaaacatgaggcaatgtgt
aattttagaccttacaactgcccgtatgctggttcagagtgttcagttgttggtgatatt
ccttacttggttgctcatttgagggatgaccacaaggtagacatgcattcaggttgcact
tttaaccatcggtatgtcaaatcaaatcctcgagaagtggaaaatgcgacctggatgtta
acggtttttaattgtttcggtcagtacttctgtctccattttgaagcctttcagcttggc
gtggctcctgtttacatggcatttcttcggtttatgggagatgagacagatgctcgaaat
tacagctacagccttgaagttgggggcaatggaaggaaacatatctgggagggtaccccc
cggagcataagagatagtcaccggaaagttagggatagccatgacgggcttattatacaa
cgtaacatggcacttttcttctctggaggtgacagaaaagagcttaagctacgtgttact
ggaaaaatatggaaggaacagcagaatccggatggaggagcaagcataccaaacctatgt
agttaa
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