Solanum dulcamara (climbing nightshade): 129877026
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Entry
129877026 CDS
T09577
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129877026
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129877026
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129877026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_3
zf-RING_2
zf-CCCH_DUS3L
zf-C3HC4
zf-RING_5
RING_XB3-XBAT31
zf-CCCH_RBM22
zf-CCCH_9
zf-rbx1
zf-CCCH_PARP12
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
129877026
NCBI-ProteinID:
XP_055808479
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All DBs
Position
12:complement(41765535..41782465)
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AA seq
360 aa
AA seq
DB search
MSKRVLCKFFAHGACLKGDHCEFSHDWNNPSNNVCTYYQKGACAYGSRCRYEHVKLSRSQ
PSVQSSAQPQQYLLSSSAPTNVPPGMDAHNADVVPGISTEYLASSRPYDASSQPAWNQKS
ELQDALEIDDMIELNSVNPADRSICAFAAAGNCPRGENCPRVHGDLCPTCGKHCLHPFRP
QEREEHIKTCENKQKHLDLLKRSQEIECSVCLERVLSKSTAAERKFGILSECDHPFCVSC
IRNWRGSSSSGMDVNSALRACPICRKLSYFVIPSVIWYFTKEEKEEIVDNYKNKLRSIDC
KHFDFGNGTCPFGTSCFYKHQHRDGRLEEVVLRHLGSEDGSTVIAKNIRLSDFLRNLEIN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagggttctttgtaagttctttgcacatggggcatgtctgaagggggatcat
tgtgagttttcacatgattggaacaatccttctaataatgtatgcacctactaccaaaaa
ggagcttgtgcttatggaagcaggtgtagatatgagcatgttaaactgtctcgatctcaa
ccttcagttcaatcttcagcacaacctcaacaatatctgctttcaagttctgctcctacc
aatgtgcctcctggaatggacgcacataatgcagatgttgtgccaggtatttctactgag
tatttagcttcaagcagaccttatgacgcttccagccaaccagcatggaaccaaaagtct
gagcttcaagatgcattggagattgatgacatgattgagttaaacagtgttaacccagct
gatcggtcaatctgtgcttttgctgctgctggtaattgtcctcggggagaaaattgtcct
cgtgttcatggagatctgtgtccaacctgtggaaagcattgcttgcatcctttcaggcct
caggaaagagaggagcatataaaaacatgtgagaacaagcaaaagcaccttgatttattg
aagcgcagtcaagaaattgaatgcagtgtatgccttgaacgtgttctttccaagtcaaca
gcagctgagaggaagtttgggatcctttctgagtgtgatcatccgttttgtgtatcgtgt
ataaggaattggcgtggcagttcttcctctgggatggatgttaattctgcactgagggct
tgccccatatgccgaaagctttcatattttgtcattccaagtgttatttggtacttcaca
aaagaagaaaaggaagaaatagtcgacaactacaaaaacaaactcagatctatcgactgc
aagcactttgactttgggaatgggacttgtccatttgggacgagctgtttctacaagcat
caacaccgtgatggtcgtctggaggaagtggtactgcgccatcttggttctgaagatgga
agcacagtaatcgctaaaaatatcaggctctcagacttcctcaggaatttggaaattaat
tga
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