Solanum dulcamara (climbing nightshade): 129877033
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Entry
129877033 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase AIRP2-like isoform X1
KO
K25840
E3 ubiquitin-protein ligase AIRP2 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129877033
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129877033
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129877033
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_UBOX
zf-rbx1
zf-UDP
RING_ZNF598
zf-RING_16
zf-C3HC4_4
zf-RING_14
zf-RING_4
zf-RING_10
zf-P11
MTNAP1_ZnF
Motif
Other DBs
NCBI-GeneID:
129877033
NCBI-ProteinID:
XP_055808488
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All DBs
Position
12:complement(63505949..63511450)
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AA seq
252 aa
AA seq
DB search
MYTGGLGGPMRKSFKDSLKVLEADIQHANTLASDFSREYDGACLQMRMSYSPAAHIFLFL
VQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLVQLERGVTDS
EDKKQNAVCQERYKRRDDEDYRQAYDLNIEREDECGICMEANSKIVLPNCNHVMCLKCYR
EWRSRSQSCPFCRDSLKRVSSGDLWIYMDSKDAVDMPTITRENLRRLFMYIEKLPLIVPD
NVFDTYDDTHLR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtatacaggaggtttaggagggccaatgagaaaatcatttaaggattctctcaaagtt
cttgaagctgatattcaacatgccaatacacttgcatctgacttttcgagggagtatgat
ggtgcgtgcttacagatgcgaatgtcctacagtcctgcagcacacatcttccttttctta
gtgcaatggactgattgccatctcgctggtgcccttggcttgttgagaattcttatttac
aaggtatatgtcgatggcaccacaaccatgtcaactcatgaaaggaaagcaagcattagg
gagttctatgctgttatttatccctccttagttcaacttgaaagaggtgtcacggactcg
gaagacaaaaaacaaaatgcagtttgccaggagagatacaagagacgagatgatgaggat
tacaggcaagcttatgatctgaacattgaaagggaagatgaatgtggaatttgcatggag
gcgaacagcaaaattgtccttcccaactgcaatcatgtaatgtgcttgaaatgctatcgt
gaatggcgttcgaggtcacagtcgtgccccttttgccgcgatagcctgaaaagggttagc
tcgggggatctgtggatatatatggacagtaaagatgcagttgacatgccaacaattaca
agggagaatctaagaaggttgttcatgtatatagagaagttacctttaatcgtgccggat
aatgttttcgacacatatgatgatactcatctaaggtag
DBGET
integrated database retrieval system
