Solanum dulcamara (climbing nightshade): 129877076
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Entry
129877076 CDS
T09577
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129877076
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129877076
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
129877076
NCBI-ProteinID:
XP_055808530
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Position
12:complement(5786537..5789214)
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AA seq
488 aa
AA seq
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MMSGDVFSFPSSVKAVLPHHQEFQTNPNPKPNTSSKKRRNLPGTPDPDAEVIALSPKSLM
ATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKLEQVKKKVYICPEKSCIHHDPS
RALGDLTGIKKHFSRKHGEKKWKCEKCTKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRK
DSFITHRAFCDALAEESSRITSVGVNNLINFPNNAALLNQQQSNLHSGFTGFRPDFGSYA
TGNNNNSLHHQHQQHQQKPRLSLWLDQQAANNNLLQISSSSNLFDNSSTGGFQEMMQIQS
QNVFESSNSTSANFSMAEAFNSLYSDSQNSQLTKPNSTTSMSATALLQKAAQMGSTKSNQ
STFFSNNFSKLNSSSSSSPNLQSCEATDQIFAKKSEDYTTPLLQNNNGLIGCSNFSSSGI
NKAINLDEAIMQTVGMHNTQAVSMNGMDNCLTRDFLGIRHEGNCQFLPQDIIKFASMSSS
AMELSHLQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggagatgtgttttcatttccttcttctgttaaagcagtacttcctcatcat
caagaatttcaaacaaaccctaaccctaaacctaatacttcttccaagaaaagaagaaat
cttccaggaacaccagatccagatgctgaagttattgcactttcaccaaagtcactcatg
gcaacaaacagattcatatgtgagatttgcaacaaaggttttcaaagggatcagaatttg
caacttcatagaagaggacacaatcttccatggaagttaaagcaaagaaacaaactagaa
caagtgaagaagaaagtgtatatatgtccagaaaagtcatgtattcaccatgatccatcg
cgtgcacttggagacttaactggaataaagaaacattttagtagaaaacatggagagaag
aagtggaaatgtgaaaagtgtacaaagaaatatgcagttcaatcagattggaaagctcat
agtaaaacttgtggaactagagagtacaaatgtgactgtggcacactcttttccagaaaa
gatagctttatcacacacagagctttctgtgatgctttagctgaggagagttcaagaatc
acttcagttggggttaacaatttgatcaacttcccaaataatgccgcattgttgaaccaa
caacaatcaaatttacatagtgggttcacaggatttagaccagattttggtagttatgca
actgggaataataataattcccttcatcatcagcatcagcaacatcagcaaaaaccaaga
ttatcactttggttagatcaacaagcagctaataataatcttcttcaaatatcttcaagt
tcaaatctttttgacaattcaagtacagggggatttcaagaaatgatgcaaatacaatcc
caaaatgtatttgaatcatctaattcaacatctgcaaacttttcaatggctgaagcattc
aattctctgtattctgatagtcaaaacagccaattaaccaaaccaaattcgaccacgtca
atgtctgctactgcgcttctacagaaagcagcccaaatgggttctacaaaaagcaatcaa
tctactttctttagcaacaatttcagcaaactgaactcttcgtcttcctcttcaccaaat
ttacagagttgtgaagcaacagatcaaattttcgccaagaaatccgaagattacacaacg
ccgttgttacagaacaacaacggacttattgggtgttcgaattttagttcttcagggatt
aataaggcgattaatttggatgaagcaattatgcaaacagttggtatgcataatactcaa
gcagtttcgatgaacggtatggataattgtttaacgagagactttttgggaattagacat
gaagggaattgtcagtttttgccacaagatattattaagtttgcttcgatgagtagttca
gctatggaattaagccatttacagtaa
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