KEGG   Solanum dulcamara (climbing nightshade): 129877343
Entry
129877343         CDS       T09577                                 
Name
(RefSeq) glycine-rich RNA-binding protein 4, mitochondrial-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129877343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129877343
   03041 Spliceosome [BR:sdul03041]
    129877343
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     129877343
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129877343
Spliceosome [BR:sdul03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    129877343
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 129877343
NCBI-ProteinID: XP_055808811
LinkDB
Position
12:3515287..3518568
AA seq 245 aa
MAFFNKAGSILRQAVSKQHINHEISASKPSIFQLIRCMSSKLFVGGISWNTNDNTLQEAF
SKYGEVIEARVIYDRESGRSRGFGFVTFNGSEDASAAIQALDGQELDGRRIKVNIANDRT
RGYSGGGGGFGGGGNYGSGGYGGGGNYGSGGYGGGGNYGASGYGGSGNYGGAGGVDANVA
GNYGSGENSFGFGASGDNNFSSGDSYASGNTEATSSQADVNSPVDAGENYRDDNVESSDY
ADRRA
NT seq 738 nt   +upstreamnt  +downstreamnt
atggctttctttaacaaagctgggagcattcttcggcaggctgttagcaagcagcatatc
aatcatgaaatctctgcatcgaaaccttcaatttttcaacttattagatgcatgtcttca
aaactttttgttggaggaatctcatggaacacgaatgacaacactctccaagaagctttc
agcaagtatggagaagtcattgaagcaagagtcatttatgatcgagagtctggaagatct
aggggatttggcttcgttacttttaatggttctgaggatgccagcgctgccatccaggct
ttggatggacaggagcttgatggtcgtaggattaaggtaaatatagcgaatgacaggaca
agaggatacagcggtggtggtggcgggtttggtggtggtggcaattatggatctggtggt
tatggtggtggtggcaattatggatctggtggttatggtggtggtggtaattatggtgcc
tctggttatggtggcagtggcaattatggaggcgcaggtggtgttgatgctaatgttgcc
ggcaattatggaagcggagaaaacagtttcggctttggcgcaagtggtgataacaacttt
tcaagtggtgatagctatgctagtggaaacaccgaagctaccagcagccaagcagatgtt
aatagccctgttgatgcaggtgaaaattacagagatgacaatgtggagtccagtgattat
gccgacagaagagcctaa

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