Solanum dulcamara (climbing nightshade): 129877420
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Entry
129877420 CDS
T09577
Name
(RefSeq) vacuolar protein sorting-associated protein 22 homolog 1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129877420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129877420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129877420
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
129877420
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129877420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
HTH_24
DnaD_N
CDK5RAP3
TrmB
MarR_2
DUF4423
Spore_III_AA
DUF3631
Motif
Other DBs
NCBI-GeneID:
129877420
NCBI-ProteinID:
XP_055808893
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Position
12:66797919..66801568
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AA seq
251 aa
AA seq
DB search
MRRRPGIGGLQNAAAARDQYRLLGENVAKLRTDLMKEQLATFRSQLEDFARKHKNDIRKN
PAFRAQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCLATRPHNGGLISL
DDLCKLLGQRRKAVRETISEDDCLRAISKLKVLGSGFEVITVGKRKLVRSVPTELNKDHN
EILELAQAQGFVTVDEVQRRLNWSSGRATDALETLLEEGLAMIDDGHRDGKRRYWFPCVS
SVSTYVGADTL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagacggagaccgggaatcggcggtttgcagaacgccgcggcggctagggatcaatat
cgattgttaggggaaaatgttgcgaaattgagaacagatcttatgaaagagcagctcgct
acttttcgatctcagcttgaagacttcgctcgtaaacacaagaatgacattcgcaagaac
cctgcattcagggcacagttccacgagatgtgtgctaaagtcggagtagatcctctagca
tcaaacaagggtttctgggcagaactgttggggattggtgacttctattatgaacttggg
gtacagattattgaggtatgcttggctactagaccccacaatggaggtttgataagcttg
gatgatctttgtaaactgcttggtcagagacggaaagctgttcgcgagacaatatctgaa
gatgactgcttgcgtgctataagcaagctgaaggtattaggtagtggctttgaggtgatt
acagtgggaaagagaaagcttgttagatctgtccctaccgaactgaataaggatcacaat
gaaattttagagctggcccaggctcaaggctttgtgaccgttgatgaggtacaaagacgc
ctaaactggtcttcaggtcgtgcaactgatgcgcttgaaacactgttagaggaagggctt
gccatgatcgatgatggacatagagatggcaaacgtcgatactggttcccttgtgtgtcc
tctgtctccacctatgtaggtgcagacactctttag
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