Solanum dulcamara (climbing nightshade): 129877458
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Entry
129877458 CDS
T09577
Name
(RefSeq) transcription initiation factor IIB-2 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129877458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129877458
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
129877458
Prokaryotic type
Archaeal type
TFB
129877458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
HTH_Tnp_ISL3
HTH_5
DUF7573
DmmA-like_C
FtrD-like
Motif
Other DBs
NCBI-GeneID:
129877458
NCBI-ProteinID:
XP_055808936
LinkDB
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Position
12:complement(1553957..1557774)
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AA seq
329 aa
AA seq
DB search
MDAYCSDCRKSTEVVFDHSAGDMVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGG
PMNPLLSDGGLSTVISKPDGTTSDFLTSSLGRWQNRGSNADRSFILAFKAIGVMSDRLGL
VATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATKK
EIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCSNLGMTNQAVKASQEAVKKSEEFD
IRRSPISIAAAVIYIVTQLSDEKKPVKDVSLATGVAEGTIRNSFKDLYPHLSKIIPNWYA
QGMLCIRGIFDEINRRGSFFYPKMWANTH
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtactgttcggactgtagaaagagcacagaagttgtatttgatcattcagca
ggtgatatggtttgttcggaatgtgggttagttttggaatctcattcgattgatgaaaca
tctgagtggagaacttttgctaatgagtccggtgataatgacccggttcgagttggtgga
cccatgaatcctttgctttctgatggtggattatctacagtgatctccaagcctgatgga
actaccagtgatttcttgacatcgtctttgggtcgatggcagaatcgtgggtcgaatgct
gatcgatcctttattttggcttttaaagctattggggttatgtctgataggttgggcctg
gttgcaaccataaaggaccgagctaatgagatatacaagaaggtagaagatcaaaaatct
agtagaggaaggaaccaggatgctatattggctgcttgcctatatattgcttgtcgacaa
gaagacaaacctcgaactgtgaaggaaatttgctcggttgcaaatggagctacaaagaag
gaaattggccgagcaaaggaatacatagtgaaacaactagagcttgagatgggtcaatca
gtggaaatgggaactatacatgctggggatttcatgcgacgcttttgttcaaatcttggg
atgacaaatcaagcagttaaagcctctcaagaagcagtcaaaaaatctgaagagtttgac
ataaggagaagtcccatttctattgctgcagcagttatctatatagtcactcagctttca
gatgagaagaagccagttaaagatgtgtcacttgcaactggagttgctgaaggtacgatt
cggaattcattcaaggatctatacccacatctgtcaaagataataccaaattggtatgca
caaggaatgttgtgtatccgaggaatcttcgatgaaattaacagaaggggaagcttcttt
taccccaagatgtgggctaatacacattga
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integrated database retrieval system
