Solanum dulcamara (climbing nightshade): 129877485
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Entry
129877485 CDS
T09577
Name
(RefSeq) 26S proteasome regulatory subunit 10B homolog A-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
129877485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sdul03051
]
129877485
Proteasome [BR:
sdul03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
129877485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_2
AAA_22
nSTAND3
PRS7_OB
DUF815
AAA_14
Prot_ATP_ID_OB_N
AAA_7
TIP49
AAA_33
Parvo_NS1
RNA_helicase
Mg_chelatase
AAA_18
IstB_IS21
AAA_lid_PRS2_C
AAA_28
APG6_N
AAA_3
TsaE
NPHP3_N
AAA_24
NACHT
Sigma54_activat
bpMoxR
ABC_tran
ATPase
AAA_25
ATPase_2
AAA_11
ResIII
PhoH
MutS_III
AAA_30
Motif
Other DBs
NCBI-GeneID:
129877485
NCBI-ProteinID:
XP_055808970
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All DBs
Position
12:18097259..18105367
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AA seq
399 aa
AA seq
DB search
MTSESEDVLRRRTAYAEFRKKLLQQKELNARVDAVKENLRGAKREYNKTEDDLKSLQSVG
QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
VDPMVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYARDHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRLEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAGMSA
IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgagtcagaagatgtcctccgccgccgtacagcatatgctgagttccggaaa
aagctactccagcagaaggagttaaatgctcgggtagatgcagtgaaagagaatctgcgt
ggagccaaaagggaatataataaaacagaagatgatttgaagtcgcttcagagtgttggg
cagatcataggcgaagtgctccggcctctagataacgaacgcttgatagttaaagccagt
agcggtccaaggtatgtggttggctgtcgcagtaaagtggataaggaaaaactgacttct
ggtactagagtggttctcgatatgacgactcttacaatcatgagggcactcccacgtgaa
gttgatcctatggtgtataatatgcttcatgaagatcctggcaatataagctactctgct
gtgggtggactatcagatcagatcagagagctgagagaatcaatagaactacctctgatg
aaccctgaacttttcctccgtgttggaattaagcctccaaagggtgttcttctctatggg
cctcctgggactggcaagaccttgttagccagggcaattgctagcaacattgatgccaat
ttcttaaaggtagtatcaagtgccattattgataaatacataggtgagagtgcgagatta
atccgggaaatgtttaactatgctcgtgatcatcaaccttgcatcattttcatggatgag
attgatgcaattggtgggcgtcgatttagcgagggaacaagtgcagaccgtgaaattcag
agaacgctcatggagttgcttaatcagttggatggatttgatcagcttggaaaggtaaaa
atgattatggcaacaaacaggccagatgttttggacccagctcttcttcgtcctggtcgg
ttagatagaaagatagaaatacccttgcctaatgaacaatcaagattggagatcctcaag
attcatgctgcaggaattgccaaacatggtgacattgattatgaagctgttgttaagctt
gctgagggttttaatggggctgatcttcgaaatgtgtgcactgaagctggtatgtcagca
atacgggcagagcgtgattatgtcatccatgaggatttcatgaaggctgtaaggaaactg
aatgaagcaaagaaacttgaatcaagtgcccattatagtgctgattttggcaaggagtga
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