Solanum dulcamara (climbing nightshade): 129877487 Help Entry 129877487         CDS       T09577                                  Name (RefSeq) endoribonuclease Dicer homolog 1   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism sdul  Solanum dulcamara (climbing nightshade) Brite KEGG Orthology (KO) [BR:sdul00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:sdul03036]     129877487 Chromosome and associated proteins [BR:sdul03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     129877487    microRNA pathway     RISC loading complex      129877487 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer dsrm Helicase_C PAZ DND1_DSRM DEAD ResIII Dicer_PBD SNF2-rel_dom SLFN-g3_helicase Flavi_DEAD Cas3-like_C_2 TrbI_Ftype Piwi Motif Other DBs NCBI-GeneID:  129877487 NCBI-ProteinID:  XP_055808972 LinkDB All DBs Position 12:62440104..62456622 Genome browser AA seq 1918 aa AA seqDB search MDGNDDGVSEKPSYWIDAYEDISCDDLIQDFVGSNTVPVAPLNQLGPDGSLDPCFFGGID GILEKLKNGDGSVPSVDGNNSNVHSETLPASGICKDNVPQVNKDVEHNRGDGGKKSLHEE NGFSRHKERGYNDKEERNGKRARLGDDSYQRRGCDRPLARKRLRESDEINRVGRDQRRRR ENHGGRGGRDRNWREGSGFWEWDKERKEMVYRVGSWEADRNREGKLSTERSREPSGAIEK KDDKSKEQAPKEEARKYQLDVLEHARKNNTIAFLETGAGKTLIAILLMKSLCSDLQKKNK KMLAVFLVPKVPLVYQQAEVIREQTGYQVGHYCGEMGQDFWDARRWQREFETKQVLVMTA QILLNILRHSIIKMEAINLLIMDECHHAVKKHPYSLVMSEFYHTTQKEKRPSVFGMTASP VNLKGVSSQVDCAIKIRNLETKLDSVVFTIKDRKELEKHVPMPSEVVVEYDKAASLWSLH EQIKQMELAVEEAALLSSRRSKWQFMGACDAGARGELRQVYGVSERTESDGAANLIQKLR AINYALGELGQWCAYKVAHSFLTALQNDERASYQLDVKFQESYLDKIVSLLQCQLLEGAV AQSNLNGEMDKGDYLNSDRPDEMEEGELLESHVVSVGEHVDVILGAAVADGKVTPKVQSL IKILLKYQHTEDFRAIIFVERVVTALVLPKVFEELPSLNFINSSSLIGHNNSQEMRTGQM QDTIAKFRDGRINLLVATSVAEEGLDIRQCNVVIRFDLAKTILAYIQSRGRARKPGSDYI LMVERDNSSHEAFLRNARNSEETLRKEAIERTDISHLKDASKLISGEAPTDSVYQVESTG AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMESHEKSGCPTEYSCRLQLPCNAPFETL DGPVCSSMRLAQQAVCLDACKKLHQMGAFTDMLLPDKGSGVESEKVEQDDEGDPIPGTSR HREFYPEGVADILRGDWILSGKDSLVSSKFIHLYMYAIKCVNIGPSKDPFLTDVSEFAIL FGNELDAEVLSMSMDLFIARTVVTKATLVFRGPIDVTESQLASLKSFHVRMMSIVLDVDV EPSTTPWDPAKAYLFAPVTGGESGDPIKDINWDHIKKITETGVWSNPLQRARPDVYLGTN ERALGGDRREYGFAKLRHGMAVGLKSHPTYGVRGAIAHYDLVQASGLVPNRSSLDVVEVD LNKDKIMMADCSLRAEDIVGRIVTAAHSGKRFYVDCIRSDMTAENSFPRKEGYLGPLEYS SYAAYYKQKYGVDLVYKKQPLIRGRGVSYCKNLLSPRFEHSEEHEGELEEATDKTYYVFL PPELCVLHPLPGSVVRGAQRLPSIMRRIESMLLAVQLKEMIGYPVPALTILEALTAASCQ ETFCYERAELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQNALSKGLQS YIQADRFSPSRWAAPGVLPVYDEDPNEDETSIFDHETTENGTVAAKALAGDEFEDEETEE GELDNDSGSYRVLSSKTMADVVEALIGVYYVEGGKYAANHFMKWIGVEVDFDFNFNETEY SIRSCSIPENVLKSVDFDALQGALNISFNDKGLLLEAITHASRPSSGVSCYQRLEFVGDA VLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHSLHLHLRHGSSALDKQIR DFVNEVKNELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGCNTKSVWEVFQPLLH PMVTPETLPMHPVRELQERCQQDAQGLEYKATRSGNMATVEVYVDGLQVGMAQNPQKKMA QKLAARNALVVLKEREEAEAKKADDGKKKKSGNPSFTRQTLNDICLRKNWPMPLYRCVHE GGPAHAKRFTYGVRVNISDKGLDKGFTDECIGEPMPSVKKAKDSAAALLLELLNRRYS NT seq 5757 nt NT seq  +upstreamnt  +downstreamnt atggatggtaatgatgatggagtttctgagaaaccctcttattggattgatgcttatgag gacatctcatgtgatgatcttattcaagattttgttgggtcgaacactgtacccgttgcg ccattgaatcaattgggtccggatgggagtcttgatccttgtttctttggtggtattgat gggattcttgagaaattaaagaatggtgatggttctgtaccttctgtggatggaaacaac agtaatgtacatagtgaaactttacctgcatctggaatttgcaaggacaatgtgccacaa gttaataaggatgtggagcacaatagaggtgatggggggaagaagtctttacatgaagaa aatggattttccaggcataaggaacgaggttataatgataaagaagagagaaatggaaaa agggcgcggcttggtgatgatagctaccagaggagaggctgtgatagacctttggctagg aagagacttcgggagagtgatgagatcaatagagtagggagggatcaaagaaggagaaga gaaaatcatggtggtcgtggtggaagagataggaactggagggaagggagtggcttttgg gaatgggacaaagaaaggaaagagatggtctatcgtgtgggttcatgggaagctgataga aatcgagaggggaagttatcaactgagagaagccgtgaaccttctggagctattgagaag aaagatgacaaatcaaaggaacaagctcccaaggaggaagcacgcaagtatcagttggat gtacttgaacatgccagaaagaacaatacaatcgcttttcttgaaacaggagcaggaaaa acgcttattgccatcctcctcatgaagagtctatgtagtgacttgcaaaagaagaacaag aaaatgctggcagtttttctggttcctaaagttccacttgtttatcagcaagcagaagtt attcgtgagcaaactggttatcaagttggccattattgtggtgaaatgggccaagatttt tgggatgcacggagatggcagcgtgagtttgaaactaaacaggtcctggttatgactgct cagattctcttgaacatcttgaggcacagtataataaaaatggaagcaattaatctcctt attatggatgaatgccaccatgctgtaaagaagcatccatattctttagtaatgtctgag ttctatcatacaacacaaaaggagaaaaggccatctgtttttggcatgactgcttcacct gttaacttgaagggtgtttccagccaagttgattgtgcaataaagattcgtaacttggaa actaaattagattctgtcgtctttaccataaaagaccgcaaggagctggagaaacatgtg ccaatgccgtcagaagtagtagtggagtatgataaagctgctagtctgtggtcccttcat gaacaaataaaacaaatggaattagcggttgaagaagctgctctgttaagctccagaaga agtaaatggcaatttatgggcgcttgtgatgctggagctagaggagagctgcgccaagtc tatggtgtttctgaaagaactgaaagtgatggggctgctaatctaattcaaaagttgagg gctatcaactatgctcttggtgaactgggacagtggtgtgcctataaggtagcacattct tttttgacagctctacaaaatgatgaaagggcaagctaccagcttgatgtcaagttccaa gaatcctacctggataagattgtctctctcttgcaatgtcagttattggagggagccgta gcacaaagtaacttgaatggtgagatggataaaggtgactatctgaatagtgataggcct gacgagatggaggagggcgagcttctagaaagtcatgttgtatctgttggagagcatgta gatgtgattctaggagctgcggtggctgatgggaaagtgacacctaaagttcaatcatta attaagattcttctcaagtatcagcatactgaggattttcgtgctataatatttgttgaa cgcgttgtgactgcattggttcttccaaaggtttttgaggagctcccttccctaaatttt atcaattcatcaagtttaatcgggcataacaatagtcaagaaatgagaacaggccaaatg caggacacaatagccaaatttcgagatggtcgtattaatttgttagtcgctactagtgtt gctgaggaaggacttgacatccggcaatgcaacgttgtcattcggtttgacctggccaaa actattttggcgtatatccagtctaggggccgtgcccgtaagcctggatcagattatatt ttgatggttgagagagataattcatcacatgaagcatttctgaggaatgccagaaacagt gaagaaacgttgcggaaagaagcaattgagcggactgatattagtcatctcaaagatgcc tccaagttgatctctggggaggcaccaacagattcagtttatcaggtggagtccactgga gctgtggtgagcttaaattctgctgttgggctgatccacttttattgctcccaattacca agtgacaggtactcgattctccgtcctgagtttataatggagagtcacgagaagtcaggt tgcccaactgaatattcatgcaggcttcaactgccctgcaatgcaccttttgagacactt gatggccctgtatgcagctcaatgcgccttgcccagcaggctgtttgcttggacgcttgc aagaagctccaccagatgggggcatttacggacatgctcttgcctgacaagggaagtggg gtggagtcggagaaagttgaacaggatgatgaaggtgatccaattcccggaacttccagg cacagggaattttatcctgaaggtgtagctgatattctgaggggtgattggattttgtcg ggaaaagattctcttgtcagctcaaagttcattcacctttatatgtatgctatcaaatgt gtgaatattggcccctcgaaggatccgttcttaactgatgtgtcagagtttgcaattctg tttggcaatgagctggatgcagaggtattatcgatgtcgatggatttatttattgctcga actgtcgtaacgaaggcgactcttgtcttcagagggccaatagatgttacagagtctcag ttggcgtccctgaagagctttcatgtaagaatgatgagcattgttttggatgttgatgtt gagccatccaccactccatgggaccctgcaaaggcatatctatttgcccctgttactggt ggtgaatctggagatcctataaaagatatcaactgggatcatattaaaaaaattactgaa actggtgtatggagcaatcctcttcagagagctcgcccagatgtatatcttggtaccaat gagcgtgctcttggtggagatcgaagggaatatggctttgcaaaattgcgacatggcatg gctgttggactgaagtctcatcctacatatggtgttagaggtgctattgcacactatgat ctggtccaagcatctggattggtccctaaccggagtagccttgatgtggttgaagttgat ttgaataaagacaagataatgatggctgattgttctcttagagccgaagatattgtagga agaattgtcactgcagctcactctggaaagagattttatgttgattgcattcgtagtgat atgactgcggagaactcgtttccaaggaaagaaggttacctaggtcctcttgagtatagc agttatgctgcttattataagcaaaagtatggagttgatttggtctataaaaagcagcct ctaataagaggacgcggtgtttcatattgcaaaaaccttctgtcaccacgatttgaacat tcagaagaacacgagggtgaactcgaagaggcaactgacaaaacgtattatgttttcctc cctcctgagctctgtgttttacatccacttcctggatccgttgttcggggtgctcagaga ttgccctcgatcatgaggaggattgagagcatgctgcttgctgttcagcttaaggaaatg attggttaccctgtcccagcactgacgatcttggaagcattgactgccgcttcttgccag gagactttctgctatgaaagagcagaacttcttggagatgcatatctaaaatgggttgtt agtcgctatcttttccttaagtatccccagaaacatgaaggccaactcaccaggatgaga caacaaatggtaagcaacatggtgctgtatcaaaatgccttgagtaagggactccagtca tacatccaagcagatcgattttctccatcgagatgggccgctcctggggtgttgcctgtc tatgacgaggaccccaatgaggatgaaacatccatatttgatcatgaaacaacagaaaat ggtactgtagcagcaaaggctctagctggtgatgagtttgaagatgaggaaactgaagaa ggtgagcttgataatgattcagggtcgtatcgtgtactctctagcaagactatggctgat gttgtggaagcactgattggagtttattatgttgagggtggaaagtatgctgcaaaccac ttcatgaaatggattggggttgaggttgatttcgatttcaatttcaatgagactgaatac tctattaggtcttgtagcattcccgagaatgtactcaagagtgtggactttgatgcatta caaggtgctttgaacatcagcttcaatgataaaggcctactgctagaagcaattacccat gcttcacgcccatcttctggggtctcctgttatcaaagactggagtttgtgggtgatgca gtattagatcatctcatcacaaggcacttgttctttacatacacagatcttcccccaggc cgattgactgacttgcgagctgcagctgtcaacaatgaaaattttgcacgtgttgctgtt aaacacagtcttcatttacaccttcgtcatgggtccagtgctctagataaacagattcgt gactttgtgaatgaggttaaaaatgaactatcaaaaccaggtttcaactcctttggtttg ggggattgcaaagctcctaaagttcttggtgatattgttgaatcaattgctggggcgatt tttctagacagtgggtgtaatactaaatctgtatgggaggtttttcaaccactgttgcat ccaatggttacaccagaaacactgccaatgcatccagttcgagaattgcaagaacgttgt caacaagatgctcaaggcttagagtacaaagcaactcgaagtgggaatatggctacagtt gaagtatatgtggatggtcttcaggttggaatggcgcagaatcctcagaagaaaatggca cagaagttggctgccaggaatgcccttgttgtgttgaaagagagggaggaagctgaagct aagaaggctgatgatgggaagaaaaagaagagtggcaacccgagttttactaggcagaca ctgaatgatatatgtttacgcaaaaattggcctatgccactctatcgatgtgtgcacgag ggtggtccagcacatgcaaagaggtttacatatggtgtacgcgtaaatatttcagataaa ggattagacaaaggatttacagatgaatgtatcggagaacctatgccgagtgtaaagaag gccaaggattctgcagctgctcttcttttggaactcttaaatagacggtactcataa

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