Solanum dulcamara (climbing nightshade): 129877502
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Entry
129877502 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129877502
KO
K19022
AP-5 complex subunit beta-1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129877502
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
129877502
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
129877502
NCBI-ProteinID:
XP_055808989
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All DBs
Position
12:complement(2165743..2170336)
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AA seq
1131 aa
AA seq
DB search
MSPELKPLSALEWENLIDDYNHGGSRRLRWTSISYAAFPLLDLTLSSLLRKDIPHNLKLQ
LLIFIEEHFSTDQNDIVSPSFLIRLLEALRSVIQSPNDGVSTSFALKEQFLISSTSIFVN
YVSYTSNCLDSSFVTPLESLIELLLTIINRPNHSVDRQTRSIACECLRELETAFPCLLSE
IGSHLWSLCQNERTHAGQSYALLLATVVHNIARLKPTVSFSNSSTLVPFTVPRFLVDENV
RDGHFHEGDLSDLSNRELRRVVAFLLECPQNLTPWGLLEFMDKTLPVAAVLDLQPSLLKV
QFSGLLHTYDPLLWHAYLVMYLSYMDSFEGKEMEIASRLLLLSKESQHHLVFRLLVLHWL
VGFIELVLKRDFEKRKNIVDMSLSFYPSVFDPLALKSLKLDLLAYCSVLIDNVNGAMSSK
GSLRMTRDKLFEDGLVCVSAFKWLPPWSMETSVAFRAIHKFLIGQTSHSENDSISNKSLL
EPAIYHTVQRTLIDSLFEYRGLVPVIVGFTDRLLTCYKHRFLGERLLKTFDDNLLPKLKI
DYKLVSYFSMLERIAESDKVSPSGLIELLTRFMVVLVEKHGPDTGLRSWSHGSKVLGICR
TMIMHHYSSKLFVGLSRLLSFTCLYFPDLEIRDNARIYLRMLICVPGKKLRDILNSGDQL
PGISPSTHSSSFFSVQSPRLSHDPKKSKNISSCMHLERMVPLLVKQSWSLSLPALGLDAK
KPSYIEPIKDNASPSEQSEFDKITDDTVISEANRHNQPPEPLRVMDSKISQIVEILRKHF
SFIPDFRHMPGLKVKISCALRFESEPFSRIWGNNMPANGVDTLPALYATVLKFSSSAPYG
SIPSCHIPFLLGQPPKGFYCFSQTNSLDIIPVEDVSETPGDDKSFKAPVLIELEPQDPIP
GFVDVFIETNADNGQIIRGQLHSITVGIEDMFLKAIVPEDIPEDAVRGYYVDLFNALWEA
CNASTSTGRETFVLKGGKGVAAIRGTRSVKLLEVPVASLIQAVERSLAPFVVCVTGDPLT
NLMKEGGVVRDIAWDEMNLGSSSTDDTIAETSLVGGPLYLKYKDDEDEGEGSYVKISKKN
LGTIQILIFLPPRFHLLFQMEVSNTSTLVRIRTDHWPCLAYVDEYLEALFC
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccggaactcaaacccttatcggcgctagaatgggaaaatctaatcgacgactac
aaccacggcggttcacggcggctccggtggacttccatcagctacgctgcctttcctctc
cttgacctaactctttcctcactcctccgcaaagatatccctcacaatctcaaactccag
ctcctcatcttcatcgaagaacacttcagcactgaccaaaacgacatcgtttcacctagt
ttcctcatccgtctcctcgaagccctccggtcagtaatccaatcaccaaatgacggcgtt
tcaacgtccttcgctctcaaggaacagttcctcatctcttcaacttcaattttcgtcaat
tacgtgagttacacatcgaattgtctcgattctagcttcgttactcctcttgaaagctta
attgagcttttgttgactattattaaccggccgaatcatagcgttgatcggcaaactcga
tcaattgcttgtgaatgtttacgtgaattagaaactgcttttccttgtttactttcggaa
attggatcacatttgtggagtttgtgtcaaaatgagcgtactcatgctggccaaagctat
gcattattgttagcaactgttgttcacaacattgctagattaaaacctactgtttcattc
agtaattcttcgacgttggttccgtttactgtacctaggtttttggttgatgaaaatgtt
agagatggacactttcatgagggggatttatcagatttgagtaacagggagttgaggaga
gtggttgcttttttgcttgaatgtccacagaatttgactccttggggattattggagttt
atggataagacattgccagttgctgcagttttggatttgcagccatctttgttgaaggtt
cagttttcgggattgcttcatacatatgatcctttgctatggcatgcctatttagtcatg
tatttaagctatatggattctttcgaagggaaagagatggaaattgcgagtcgactgctg
ttgttatccaaagaatctcagcatcatttggtttttcgattgttggtgctgcactggtta
gttgggttcatagagttggtattgaagagggattttgagaaaagaaagaatattgttgat
atgagcttgagcttttatccatcggtgtttgatccacttgctttgaaatcattgaagctt
gacttgcttgcctattgttcagttttgattgataatgtcaatggagcaatgagttcaaaa
ggcagtctgcgaatgactagagataagttatttgaagatggccttgtttgtgtatcagct
tttaaatggttgcctccttggagcatggaaacttctgtggcattccgtgcaatccataag
tttttgatcggtcagacatctcactcagaaaatgattctatatccaacaaaagccttttg
gagccagcaatctaccacactgtgcagagaacacttatagactctttgtttgaatataga
ggattggtccctgtcattgttggcttcacagaccgcttgttgacatgttacaaacatcga
tttttgggagaacgcctacttaagacatttgatgataacttgctgccaaaactcaagata
gactacaaattggtatcttacttctctatgttggaaaggattgctgagagtgataaagtt
tcacctagtgggttaatagagctccttaccaggttcatggtagttcttgttgaaaaacat
ggtccagatacaggattaaggtcttggagtcacgggagtaaagttcttggaatttgtcga
actatgatcatgcatcactatagttccaaactatttgttgggttgtctcgtcttttatca
ttcacttgtctttatttcccagatctggagattcgtgataatgccagaatttacctgcgg
atgctgatttgtgttcctgggaaaaagttaagagacattctaaacagtggggaccagctt
cctggaatttctccatctacccattccagctctttcttcagtgttcagtctcctagactt
tctcacgaccctaagaaatctaagaatatttcgtcctgcatgcatcttgagcgcatggtg
ccattgttggttaaacaatcttggtctttgtccttgccagccctgggactagatgccaag
aaacctagttatatagaacccatcaaggacaatgcgtccccaagtgagcaaagtgagttt
gacaaaattactgatgatacagtgatctctgaagccaatcggcacaatcagcctccagag
ccattacgtgtgatggattcaaagatttcgcagattgttgaaatcttgaggaagcacttt
tcatttattcctgacttcagacacatgccaggtctcaaggtcaaaatatcctgtgcttta
aggtttgagtcagagcccttcagtcgcatttggggaaacaatatgccagctaatggagtc
gatacccttcctgccttatatgcaactgttctcaagttctcttcttctgcaccatatggc
tccattccatcatgccacattccttttcttctaggtcaaccccccaaaggtttctactgt
tttagccagacgaattcccttgatattatccctgtggaagatgtttctgaaactcctgga
gatgacaaaagcttcaaagctcctgttctgattgaattggaaccacaggatccaatacct
ggttttgttgatgttttcattgaaacgaatgcagacaatggtcagatcattagaggacag
ctgcatagcattacagtgggaattgaagatatgtttctcaaagctattgttccagaagac
atccctgaagatgcagtacgtggttactacgtggatctgttcaatgctttgtgggaagca
tgtaacgcttcaaccagcactgggcgagagacatttgtactcaaaggaggcaaaggggtt
gcagcaatcagaggtactcgctccgtgaagttactagaggttcctgtggcatctttgatt
caagctgtagagcgatccttggcaccttttgttgtatgtgtaaccggtgatcctctaacc
aacctcatgaaggaggggggagttgtaagggacattgcatgggatgagatgaacttgggc
tcctcttccactgatgataccatcgcggaaaccagtttagttgggggacccctttacctc
aagtacaaagatgatgaagatgagggagaagggagttatgtcaaaattagtaagaaaaac
ctaggcaccattcagattttgatattccttccaccaagatttcatctcctttttcagatg
gaagtttctaatacttctacactcgtccgaattcgaacagatcactggccatgcctagct
tatgttgatgaatatttggaagctttattttgctaa
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