Solanum dulcamara (climbing nightshade): 129879910
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Entry
129879910 CDS
T09577
Name
(RefSeq) putative late blight resistance protein homolog R1B-16
KO
K13453
disease resistance protein
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129879910
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
WH_DRP
Rx_N
LRR_R13L1-DRL21
nSTAND3
LRR_At5g56370
LRR_RPS2
LRR_8
AAA_22
AAA_33
NPHP3_N
NACHT
AAA_18
AAA_14
AAA_16
AAA
Motif
Other DBs
NCBI-GeneID:
129879910
NCBI-ProteinID:
XP_055809622
LinkDB
All DBs
Position
2:complement(1468819..1474872)
Genome browser
AA seq
1476 aa
AA seq
DB search
MDGNFLAINPQDMEELDSHYVRGEQKLMTDPFKCMKWLKMHSYINVIPFQDVIMELNMRL
DYLQFIMKRWPNHYNKFSNVHETIKRIGIDIHEACVNTKNEKLDAASSILELVLSSGLNG
MALQREVEYAYRCLNYSNIWFEAEDTENNYLFYMGMSFLPQGVKDTKLVAEFVDTLFQKL
TYLVSFRLDDMTSQTVKSFEVKLKFLRGFFWFTWTCCIKFHRVEDLFARVRILLDRAACI
YYWCYVGKLTPDLEYDVIRTSNCFLAEMKPYETVLRDNYLRALKALQSPPLATHVPHSSK
LVVSIADSLVDNFMELDDKWSESEVPTTLRIETISQDLSLLITLLRGLRRECADNIIELK
DLSSYVKVQCNEISLNRASASFGLMDKDMLRQVTGLFHQVRGMIKIMEVEFSLIDLQNSI
SNNSMVYRKGEIEILYEELKSFATLVFNLPGQREWDSNSRHIEALSHIFETVIRSYNMKS
LNEDADKKSSSHGLFELSVKVKLIKAEVNLRKLMKNEIIQVDLVKDKIENLLGDLEFLGN
LLLDLPEQYDEHERRNDLISSVNPLAGEADSIVESICGKTSDEEVEGKINIQLSDVLQKI
KLIKTLDREICPKFPKLSKTNLPRTDGLGFLDFLIGYLVETLESNSYGTFLLKHDIEIVQ
RELAFLREFLEKFKAQHTEYDELRTLWVQIVGVAYEVEYVVDSYVSNGGGTIWYHMLSDV
LEEIRRIKENMTKFSEYGCECTTHSVGDTVFNYSMSQQTEKPKVNEVVVGFEDVLGKLKG
KVIGGQSNLDVISIVGMPGLGKTTVAKRLYLDCKATNHFDLCSWCCISQVYERKQVLIEV
LQQIIELPDKVEEKSVQDLATLLHKSVIGKRYLIFMDDIWTPDAWDELKSPFKDDNKSSR
IILTSRYVEVALYAKCYSEPEHLRWFNEEEGWMLLRQKLFQDQESCPQKFVDVGKQIVKK
CHGLPLSVVLVAGFLGKMEMREDKWLQVAESLSSYGIGDSNCRDIIELSYKHLPEYLKPC
FLYLGRFMEDEEISVSKLIWLWIAEGLVRKHITKSLEDVAQEYLVNLISRSLLMDAKKRH
TGTVKSCRLHDLLHEFCRIKAKEEQFWQDVYSDPNFQDLEQRRISSCSNATFPRYGFPVR
SLLIYAANNNEMRPSVPFVLCFRLLKVLDLERIDLRGNFPKEIEVLIHLRYLAVKIGTTY
VPRWIDKLTYLETLLIKGSRGEVEIPDTVWNMVRLRHVHINDRASFGYGKEIIDNSSKLH
DLETLSTPCLAYGDDTEKMIRKFSNLKRLRCRFLELSVQYSMKLRKKIIRFPTLDFLVHL
ESLKVFSNGKKLLHPSEFKLPENLKKLTLSNFRLPWKEISTIATLPRLEVLKLLFKAFEG
ETWQVTDDEFPALKVLKLDNVIISQWDVSDDAFPSLEKLVLQRCKELKEIPSSFSYNTTL
ESIEVSWCSISITDSAKQIQETQIEELAKDGFKIFI
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaattttttagctatcaacccacaggatatggaagagctagattctcattat
gtaaggggagagcagaagctgatgacagaccctttcaagtgtatgaagtggttaaagatg
catagttacattaatgtaatccctttccaagatgtaatcatggagcttaatatgagactt
gactatctacaatttattatgaagagatggccaaatcattacaataagttcagtaatgtc
cacgaaaccataaaaaggataggaatcgacattcatgaggcatgtgtgaatacaaaaaat
gagaagctagacgctgcttcgtcgatcctggagttagtgctgagctccggcctgaatggt
atggctcttcaaagagaagttgaatatgcttacagatgcctgaactattccaatatttgg
tttgaggctgaagatacagaaaacaattatctcttctacatggggatgtcatttcttcca
cagggtgtaaaggatactaaacttgtagcggaatttgtggacactctttttcagaagcta
acatatttagtgagttttagactcgacgatatgactagtcagacagtaaaatcttttgaa
gtgaagcttaagttcctcagagggttcttctggtttacatggacatgttgcatcaaattc
catagagtggaggatctctttgctcgcgttagaattctactcgaccgggcagcatgtatt
tattactggtgttatgttggaaaattgactcctgatttggaatatgatgtgatccgaaca
agtaattgttttctggcagagatgaaaccttatgagacagtgctgagggacaactatctc
agagccttgaaggctttacagtcgccaccgttggctactcatgttccacacagcagtaag
cttgttgtatccattgcagattctcttgtcgacaatttcatggagctagatgataaatgg
tctgaatcggaagttcctacaactcttcgaattgaaaccattagtcaagatcttagcctc
ttgataactttgttgagaggcttgcgaagagagtgtgctgacaacattatagagttgaaa
gatctctcatcatatgtcaaggttcaatgtaatgagataagtctaaacagagcctcagct
tctttcgggctgatggacaaagacatgttgagacaagttactggtttgttccatcaagtg
aggggaatgatcaaaatcatggaggtagaattctctttgatagatctacagaattccatt
tccaacaactcaatggtttatcggaaaggtgaaatcgaaatcctttatgaggagctcaaa
tcctttgcaacacttgtattcaatcttccaggacagcgggaatgggatagtaattcgagg
catattgaagctctgtctcatatttttgaaactgtcatcagatcctataacatgaaatct
ttgaatgaagacgcggacaaaaagtctagtagtcatggcctgtttgaattatcagtgaaa
gtcaagctcatcaaggccgaggtcaatttaaggaagctgatgaagaatgagataattcaa
gtagatcttgtgaaggataaaattgaaaaccttttaggtgatcttgagtttttggggaat
cttctgttggatctgcccgagcagtatgatgagcatgaaagaaggaatgatctcataagt
agtgttaatccgttggctggagaagcagattccatcgttgagtctatttgcgggaagaca
agtgatgaagaggtggaaggaaaaataaacattcaactctctgatgtgctacaaaagata
aagttaatcaagacattggatagggaaatttgtcctaaatttccaaaattgtctaagact
aatctccccagaactgacggtctaggctttcttgacttcctcattggatatcttgtggag
accttagaatctaacagttatgggacttttctcttaaagcatgacattgagattgttcaa
agggaactagcatttctgagagaatttcttgaaaagttcaaagcacaacatactgagtac
gatgagctgagaactctatgggtacaaatagtaggtgtggcatatgaagtggaatatgtt
gtcgactcatatgtttctaatggaggtggaacaatttggtaccatatgttgtctgatgtc
ttagaagagattcgtcgtatcaaagaaaatatgacaaagttctctgaatatggatgtgaa
tgtacaacacattctgttggtgatactgttttcaattatagtatgtcacagcaaactgaa
aagccaaaagttaatgaagtggtagttggtttcgaggatgtcttaggaaaactaaaaggt
aaagtcattggaggacaatcgaacttagacgttatctcaattgtcggaatgcctggactt
ggcaaaaccactgtggccaagaggttatacttagattgcaaagctaccaatcactttgat
ttgtgttcttggtgttgtatttctcaagtctatgaacggaaacaagtgttgattgaagtt
ttacaacaaatcattgagctccctgacaaagttgaagaaaagagtgtccaagatttggct
actttgttgcacaaaagtgtcattggaaagaggtacctcattttcatggatgatatatgg
actcctgatgcatgggatgagttgaaaagtcctttcaaagatgataacaaatcaagtagg
atcattttaacaagccgatatgttgaagtagcattgtatgccaaatgttacagtgaacct
gaacaccttcgttggttcaatgaagaagaaggttggatgttgttgcgacaaaagttattc
caagaccaggaatcatgtcctcaaaaatttgtggatgtcggtaaacaaattgtaaaaaag
tgccatggactaccactttcggttgttctagtggcaggttttctcgggaagatggagatg
agagaagataagtggttacaagtggcggaaagtctaagctcgtatggaattggtgattca
aactgtagagacataatagagctgagttacaagcatttacctgaatatcttaaaccttgt
tttctttacttgggtagatttatggaagatgaagaaatctcagtctcgaagttaatatgg
ttatggattgccgaaggtcttgttagaaaacatataacaaagagcttagaggatgtggct
caagaatacttggtgaatctcattagccgaagcctattaatggacgccaaaaagagacat
acaggcacggttaaatcatgtcgacttcatgatctcttacatgaattttgtaggatcaaa
gcaaaagaagagcagttttggcaggatgtatacagtgatccaaatttccaagatctggag
caacgtcggatatcatcatgttctaatgccacatttccaagatatggcttccctgttcgc
tctctactaatctacgcagccaataacaacgagatgagaccatctgtcccatttgtttta
tgcttcagacttcttaaggtgctggatttggagcgcattgaccttcggggtaactttcca
aaagaaatagaagtgctaattcatttgaggtatttagctgttaaaataggtacgacttat
gttccccgttggatagacaaactgacatacctagaaacacttttgattaaaggatcaaga
ggggaagtggagataccagacactgtttggaacatggtaaggttgagacatgtgcacata
aacgatagagcgtcttttggttacggaaaagagatcattgataattcgtccaaattacat
gacttggaaacactttcaacgccatgtcttgcctatggagatgacacggagaaaatgata
aggaagttctctaatcttaagagattgaggtgtaggttcttggagttgagtgttcagtat
tcaatgaagttgagaaaaaaaatcattcgttttcccacgttggactttttggttcatctt
gaatcactgaaggtgttctctaatggcaaaaaacttttacatcctagtgaattcaagctc
ccggagaatctaaagaagttgacactttcaaatttccgcttaccatggaaagaaatatct
acaatcgcaacacttccaaggctcgaggtgctcaagttgctgtttaaagccttcgaggga
gaaacatggcaagtgacagatgatgagttccctgcactcaaagtgttgaaattagacaat
gtaattatctcgcaatgggatgtctctgatgacgccttccctagtcttgagaaattggtt
ttgcaaagatgtaaggaacttaaggagatcccttcttctttcagttacaacactactcta
gagagcatcgaagttagttggtgcagcatttctatcacagactcagctaagcagattcag
gagacacaaattgaagagctcgcgaaggatggtttcaaaatctttatctag
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integrated database retrieval system
