Solanum dulcamara (climbing nightshade): 129879911
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Entry
129879911 CDS
T09577
Name
(RefSeq) putative late blight resistance protein homolog R1B-8
KO
K13453
disease resistance protein
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129879911
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
WH_DRP
NB-LRR
Rx_N
LRR_R13L1-DRL21
LRR_At5g56370
nSTAND3
AAA_22
AAA_33
NPHP3_N
AAA_18
NACHT
AAA_14
AAA_16
LRR_RPS2
AAA
Motif
Other DBs
NCBI-GeneID:
129879911
NCBI-ProteinID:
XP_055809623
LinkDB
All DBs
Position
2:complement(1498644..1504852)
Genome browser
AA seq
1477 aa
AA seq
DB search
MDGNFLAINPQDIEELDSHYVRGEQKLMTDPFKCMKWLRMHSYINVIPFQDVIMELNMRL
DYLQFIMKRWPHRYDTFSNVRETIKRIGIGIHEACVSTKNEKLDAALSILELMLSSVLNG
NALQREVEYAYGRLNYSNNWFGAEDTENNYPFYLGMSFFPQGVKDTNLVAEFVDTLFQKL
TYLVSLRLDDMTSQRVESFEVKLKFLRGFFWFTWTCCIKFHGVEDLFAGVKILLDLAACI
YYWCYVGKLTPDLEYDVIRTINCFLEEMKPYETVLRDNYLRALKALQSPPLATHVPHSSK
LVVSIADSLVDNFMELDGKWYVSEVPTTLRIETISQDLSLLITLLRGLRRECADNIIELK
DLLSYVKVQCNEISLNRASVSFGRMDKDMLRQVTCLFHQVRGMIKIMEVEYSLIDLQNSI
SNNSMVYRKGEIEILYEELKSFATLVFNLPGQREWDSHSRHIEAVSHIFETVIRSFNMRS
LNEDADKKSSSHGLFELSVKVKLIKAEVNLRKLMKNEIIQVDLVKDKIENLLGDLEFLGN
LLLDLPEQYDEHGRRNDLLSSVNAVAGEADSIIESLCGKTSDEEVAGKISIQLSDVLQKI
KLIKTLDREICPKFPKLSKTNLPRTDGLGFLDFLIGYLVETLESNSYGTFLLKHNIETVQ
RELAFLREFLEKFKEQHTEYDELRSLWVQIVGVAYEVEYVVDSYVSNGGGTIWYHMLSDV
LEEIRHIKENMTKFSEYGYECTTHSVGDTVSNNSMSQQTEKPKVNEVVVGFEDVLGKLKG
KVIGGQSNLDVISIVGMPGLGKTTVAKRLYLDCKATNHFDLCSWCCISQVYERKQVLIEV
LQQIIELPDKIEEKSVQDLATLLHKSVIGKRYLIFMDDIWTPDAWDELKSPFKDDNKSSR
IILTSRYVEVALYAKCYSEPEHLRWFNEEEGWMLLRQKLFQDQESCPQKFVDVGKQIVKK
CHGLPLSVVLVAGFLGKMEMREDKWLQVAESLSSYGIGDSNCRDIIELSYKHLPEYLKPC
FLYLGRFMEDEEISVSKLIWLWIAEGLVRKHITKSLEDVAQEYLVNLISRSLLMDAKKRH
TGTVKSCRLHDLLHEFCRIRAKEEQFWQDVYSDPNFQDLEQRRISSCSNATFPRYGFPVR
SLLIYAANNNEMMGPSVPFVLRFRLLKVLDLERLDLWGNFPKEIEVLIHLRYLAVKIGTT
DVPRWIDKLTYLETLLIKGSRGEVKIPDTVWNMVRLRHVHINDRASFGYRKEIIHNSSKL
YDLETLSTPCLAYGDDMEKMIRKFSNLKRLRCRFLESSGQYSMKLRKKIIRFPTLDFLVH
LESLKVFSNGKKLLHPSEFNLPENLKKLTLSNFRLPWKEISTIATLPRLEVLKLLLKAFE
GETWQVTDDEFPALKVLKLDNVIISQWDVSDDAFPSLEKLVLQRCKELKEIPSSFSYNTT
LESIEVSWCSISITDSAKQIQETQIEELAKDGFKIFI
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaattttttagctatcaacccacaggatattgaagagctagattctcattat
gtaaggggagagcagaagctgatgacagaccctttcaagtgtatgaagtggttaaggatg
catagttacattaatgtaatccctttccaagatgtaatcatggagcttaatatgagactt
gactatctacaatttattatgaagagatggccacatcgttacgatacgttcagtaatgtc
cgcgaaaccataaaaaggataggaatcggcattcatgaggcatgtgtgagtacaaaaaac
gagaagctagacgctgctttgtcgatcctggagttaatgctgagctccgtcctgaatggt
aatgctcttcaaagagaagttgaatatgcttacggacgcctgaactattccaataattgg
tttggggctgaagatacagaaaacaattatcccttctacttggggatgtcattttttccg
cagggtgtaaaggatactaaccttgtagcggaatttgtggacactctttttcagaagcta
acatatttagtgagtttaagactcgacgatatgactagtcagagagtagaatcttttgaa
gtgaagcttaagttcctcagagggttcttctggtttacatggacatgttgcatcaaattc
catggagtggaggatctctttgctggcgttaaaattctactcgacctggcagcatgtatt
tattactggtgttatgttggaaaattgactcctgatttggaatatgatgtgatccgaaca
attaattgttttcttgaagagatgaaaccttatgagacagtgctgagggacaactatctc
agagccttgaaggctttacagtcgccaccgttggctactcatgttccacacagcagtaag
cttgttgtatccattgcagattctcttgtcgacaatttcatggagctagatggtaaatgg
tatgtatcggaagttcctacaactcttcgaattgaaaccattagtcaagatctcagcctc
ttgataactttgttgagaggcttgcgaagagagtgtgctgacaacattatagagttgaaa
gatcttttatcatatgtcaaggttcaatgtaatgagataagtctaaacagagcctcagtt
tctttcgggcggatggacaaagacatgttgagacaagttacttgtttgttccatcaagtg
aggggaatgatcaaaatcatggaggtagaatactctttgatagatctacagaattccatt
tccaacaactcaatggtttatcggaaaggtgaaatcgaaatcctttatgaggagctcaaa
tcctttgcaacacttgtattcaatcttccaggacagcgggaatgggatagtcattcgagg
catattgaagctgtgtctcatatttttgaaactgtcatcagatcctttaacatgagatct
ttgaatgaagacgcggacaaaaagtctagtagtcatggcctgtttgaattatcagtgaaa
gtcaagctcatcaaggccgaggtcaatttaaggaagctgatgaagaatgagataattcaa
gtagatcttgtgaaggataaaattgaaaaccttttaggtgatcttgaattcttggggaat
cttctgttggatctgcccgagcagtatgatgagcatggaagaaggaatgatctcctaagt
agtgttaatgcggtggctggagaagcagattccatcattgagtctctttgcgggaagaca
agtgatgaagaggtggcaggaaaaataagcattcaactctctgatgtgctacaaaagata
aagttaatcaagacattggacagggaaatttgtcctaaatttccaaaattgtctaagact
aatctccccagaactgacggtctaggctttcttgacttcctcattggatatcttgtggag
accttagaatctaacagttatgggacttttctcttaaagcataacattgagactgttcaa
agggaactagcatttctgagagaatttcttgaaaagttcaaagaacaacatactgagtac
gatgagctgagaagtctatgggtacaaatagtaggtgtggcatatgaagtggaatatgtt
gtcgactcatatgtttctaatggaggtggaacaatttggtaccatatgttgtctgatgtc
ttagaagagattcgtcatatcaaagaaaatatgacaaagttctctgaatatggatatgaa
tgtacaacacattctgttggtgatactgtttccaataatagtatgtcacagcaaactgaa
aagccaaaagttaatgaagtggtagttggtttcgaggatgtcttaggaaaactaaaaggt
aaagtcattggaggacaatcgaacttagacgttatctcaattgtcggaatgcctggactt
ggcaaaaccactgtggccaagaggttatacttagattgcaaagctaccaatcactttgat
ttgtgttcttggtgttgtatttctcaagtctatgaacggaaacaagtgttgattgaagtt
ttacaacaaatcattgagctccctgacaaaattgaagaaaagagtgtccaagatttggct
actttgttgcacaaaagtgtcattggaaagaggtacctcattttcatggatgatatatgg
actcctgatgcatgggatgagttgaaaagtccttttaaagatgataacaaatcaagtagg
atcattttaacaagccgatatgttgaagtagcattgtatgccaaatgttacagtgaacct
gaacaccttcgttggttcaatgaagaagaaggttggatgttgttgcgacaaaagttattc
caagaccaggaatcatgtcctcaaaaatttgtggatgtcggtaaacaaattgtaaaaaag
tgccatggactacctctttcggttgttctagtggcaggttttctcgggaagatggagatg
agagaagataagtggttacaagtggcggaaagtctaagctcgtatggaattggtgattcg
aactgtagagacataatagaactgagttacaagcatttacctgaatatcttaaaccttgt
tttctttacttgggtagatttatggaagatgaagaaatctcagtctcgaagttaatatgg
ttatggattgccgaaggtcttgttagaaaacatataacaaagagcttagaggatgtggct
caagaatacttggtgaatctcattagccgaagcctattaatggacgccaaaaagagacat
acaggcacggttaaatcatgtcgacttcatgatctcttacatgaattttgtaggatcaga
gcaaaagaagagcagttttggcaggatgtatacagtgatccaaatttccaagatctggag
caacgtcggatatcatcgtgttctaatgccacatttccaagatatggcttccctgttcgg
tctctactaatctacgcagccaataataacgagatgatgggaccatctgtcccatttgtt
ttacgcttcagacttcttaaggtgctggatttggagcgccttgacctttggggtaacttt
ccgaaagaaatagaagtgctaattcatttgagatatttagctgttaaaataggtacgact
gatgttccccgttggatagacaaactgacatacctagaaacacttttgattaaaggatca
agaggggaagtgaagataccagacactgtttggaacatggtaaggttgagacatgtgcac
ataaacgatagagcgtcttttggttacagaaaagagatcattcataattcttccaaatta
tatgacttggaaacactttcaactccatgtcttgcctatggagatgacatggagaaaatg
ataaggaagttctctaatcttaagagattgaggtgtaggttcttggagtcgagtggtcag
tattcaatgaagttgagaaaaaaaatcattcgttttcccacgttggactttttggttcat
cttgaatcactgaaggtgttctctaatggcaaaaaacttttacatcctagtgaattcaat
ctcccggagaatctaaagaagttgacactttcaaatttccgcttaccatggaaagaaata
tctacaatcgcaacacttccaaggctcgaggtgctcaagttgcttcttaaagccttcgag
ggagaaacatggcaagtgacagatgatgagttccctgcactcaaagtgttgaaattagac
aatgtaattatctcacaatgggatgtctctgatgacgccttccctagtcttgagaaattg
gttttgcaaagatgtaaggaacttaaggagatcccttcttctttcagttacaacactact
ctagagagcatcgaagttagctggtgcagcatttctatcacagactcagctaagcagatt
caggagacacaaattgaagagctcgcgaaggatggtttcaaaatctttatctag
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integrated database retrieval system
