Solanum dulcamara (climbing nightshade): 129879973
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Entry
129879973 CDS
T09577
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
sdul04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129879973
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129879973
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdul01009
]
129879973
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129879973
03036 Chromosome and associated proteins [BR:
sdul03036
]
129879973
Protein phosphatases and associated proteins [BR:
sdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129879973
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129879973
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129879973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
HEAT_EZ
PDS5
SCD
Adaptin_N
Cnd1
CLASP_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
129879973
NCBI-ProteinID:
XP_055809712
LinkDB
All DBs
Position
2:2755952..2763473
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWFVPLVKRLAAGEWFTARVSACGLFHIAYSSAPEMLKAELRSIYSQLCQDDMPMVR
RSAATNLGKFAATVESAYLKSDIMSIFDGLTEDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGIGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LDMTTSPHYLYRMTILRSISLLAPVMGSEITCSKLLPVVVTATKDRVPNIKFNVAKVLQS
LIPIVDNSVVEKTIRPSLVELAEDPDVDVRFYANQALQSIDNVMMSG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtagatgaaccattgtacccgatagccgtgttaatagatgaacttaagaat
gatgatatccagttgcggttgaattctattaggcggttatcaactattgcacgtgcactc
ggtgaggagagaaccaggaaggagttgatcccgtttttgagtgaaaataatgacgacgat
gatgaagtgttgctggcaatggcagaagagttgggcgtgtttattccttatgttggaggc
gtggagcatgctcatgttcttctcccacctctagagaccctttgtacagttgaggagacc
tgtgtgagggataaagccgtggagtcattgtgtagaattggatcccagatgagggagagt
gatttggttgattggttcgtcccgcttgtgaagaggctagcagctggtgaatggttcaca
gcaagagtttctgcttgtggtctctttcatattgcttactcaagtgccccagagatgttg
aaagcagaacttcggtctatttacagccaattgtgtcaagacgacatgcctatggtgcga
aggtcggctgctacaaacttggggaagtttgctgctacagttgaatctgcttacctcaag
agtgacatcatgtcaatatttgatggtcttacagaggatgatcaggattctgtgcgctta
ttagctgttgagggctgtgctgcacttggcaagctgttggagccccaggactgtgtggca
catatcctgcctgtcattgtcaacttctctcaggacaagtcatggcgcgttcgatacatg
gttgctaaccagttgtacgaactatgtgaagctgtagggcctgagcccactaggacggat
ttggtgcctgcctatgtccgtttgcttcgagataatgaagctgaagttcgcatagctgct
gcaggaaaagtcaccaaattctgcaggattcttagtcctgagcttgctattcagcatatt
cttccctgtgtgaaggaattatcatcagactcttcacagcatgtcagatctgctttggct
tccgttataatggggatggctcctgttttgggaaaggatgcaaccattgaacatcttctt
ccaatatttctttcccttctgaaggacgagtttcccgatgtgcgcctgaacatcattagc
aagcttgatcaagtcaatcaggtgattggaattgatttattgtcccaatctctgttgcca
gctattgttgagctggcagaggacaggcattggcgagtccgtcttgcaataatagaatac
atacctctattggcaagtcaattgggcataggattttttgatgataagctgggtgctctt
tgcatgcaatggttacaggacaaggtttattcaattagagatgctgctgctaataacttg
aagcgtcttgcagaagaatttggtccagagtgggcaatgcagcatataattcctcaggtc
ttggatatgactaccagtccacattatttgtatcgaatgactattcttagatcaatttca
ttgcttgcaccagtaatgggttctgagataacttgttctaagttgttgcctgtggttgtt
actgcaacaaaggatagagtgcccaacattaaatttaatgtggcaaaggtgttgcaatcc
cttatacctattgttgacaactcggtggtggagaaaaccattcggcccagtttagtagag
ctagctgaagaccctgatgtcgatgttcgcttttatgccaatcaagcacttcagtcaatc
gataacgtcatgatgtcaggttag
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