Solanum dulcamara (climbing nightshade): 129879988
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Entry
129879988 CDS
T09577
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129879988
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
129879988
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Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
129879988
NCBI-ProteinID:
XP_055809741
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Position
2:complement(3101651..3114063)
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AA seq
609 aa
AA seq
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MRTHGGQTVHRCSFMRRRNYWNFPAKSRFELRRLKITRSFTGADSIEQNPSAGDVELSLV
VFNVHDSYSACMLQRSGWTRNIDVFFQWLSALPFSGGGFNDVAAAEGLASALMMFSSFNG
SQQTQQNADGQRHCILVAASNPYPLPTPVYYPAMLNLEQSGNIEAHTSLRLADAEIVAKA
FPQCSVSLSVICPRKLPKLRAIYNAGKHDPQAADPPVDTSKNPNFLVLISENFSRDCAAF
SHTEMESLAPNQSLVEMDMTSVPPISGPANSSVMNQQPISAGNIPAAPVNIEPAMATSVC
SPAPPHIPIAHPTSQVAASLQSGLPISISEEMVPNNENTKETTPIVSVMTQSLGLPFSGA
AANVGILNEVASAISTAPTVLTSGQLGFTSISGFAPIARTDQISQNFGPASLTLMAPSIF
GNSNLCMSQPLSNILGGTGAGSQTVPVMSRGNLPGSQMMQSGIGMHRNVPTGMHTGMPSG
QLLSNIQGGIDAGSLAAPVMSQGNFSGSQMMPRGIGMHQNVPSGMGSSMPLEIGRMMPTP
GMTQQGQPGILALGRNNSAEANMSLSQQQTMATSPSAQSGYVKIWETQLCKYHIQVSSIN
IWEKCSCKV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacacatggcggacaaacagttcatcgttgctcatttatgcggcggcgcaattat
tggaactttccggcgaagagtcggttcgaattgcgccggcttaaaataacacggtccttc
actggagctgattcaatagaacagaacccatctgctggcgatgtagagctgtcattggtg
gtctttaatgtgcacgattcctacagtgcttgcatgttacaaagaagtggctggacaagg
aacatagatgtgtttttccagtggctatcagctctacctttctcaggtggtggtttcaat
gatgttgcagctgcagaaggccttgcttcagcattaatgatgttttcttcattcaatgga
agccaacaaactcaacaaaatgctgatgggcaaagacattgcatacttgttgccgcaagt
aacccttatccattgcctacaccagtttattatccagctatgctgaatctggagcagagt
ggaaatattgaagcacataccagtcttcgactagctgatgctgagatagttgcaaaggca
tttcctcagtgctctgtttccctctctgttatatgcccaaggaagcttccgaaattaaga
gcaatatataatgcgggaaaacacgatccgcaagcagctgacccgcctgttgatacgtct
aagaatccgaattttcttgtattaatttcggaaaatttcagcagggattgtgctgctttc
agtcacactgaaatggaaagtttggcgccaaaccagagcctggttgaaatggatatgact
tctgtgcctccaatttccgggccagctaattcatcagttatgaatcaacaacccatttca
gctggaaatattcctgctgcaccggtaaatatcgagcccgccatggcgacctctgtttgt
agtcctgcacctccacatattcctattgctcatcctacttctcaagttgctgcaagcttg
caaagtggtttacctatttctatttcagaggagatggttccgaataatgagaatactaag
gaaacaacacctattgtcagtgtgatgacacagtccttaggtcttccatttagtggtgca
gctgctaatgtcggaatattgaatgaagtggcttctgctatatctactgctccaactgta
ttaacatcggggcaactaggtttcacatcaatatctgggtttgctccaattgccagaact
gatcagatatctcaaaacttcggtcctgcatcattaactttgatggctcccagtatattt
gggaattctaacctttgcatgtcccaaccattgagcaatatcctaggaggcactggtgca
ggcagtcaaacagtacctgtaatgagtcgaggaaatcttcccgggtctcaaatgatgcaa
agcgggataggcatgcaccggaatgtgccaactggaatgcatactggtatgccttcggga
caactgttgagtaatatccaaggaggcattgatgcaggcagtctagcagcacctgtaatg
agtcaaggaaatttttctgggtctcaaatgatgccaagagggataggcatgcaccagaat
gtgccaagtggaatgggtagtagtatgcctttggaaattggcagaatgatgcctactcca
gggatgactcaacaaggacagcctggaatattggctcttggcaggaataacagtgcagaa
gctaacatgtctctatctcagcagcaaacaatggctacatcaccatcagctcagtcaggt
tacgtcaaaatctgggagacacaactgtgcaaatatcacatccaagtttcatccatcaat
atctgggagaaatgttcttgtaaagtctga
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