Solanum dulcamara (climbing nightshade): 129880028
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Entry
129880028 CDS
T09577
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03020
RNA polymerase
sdul03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129880028
09124 Replication and repair
03420 Nucleotide excision repair
129880028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129880028
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129880028
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129880028
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129880028
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
129880028
NCBI-ProteinID:
XP_055809815
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All DBs
Position
2:complement(4292381..4297374)
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AA seq
319 aa
AA seq
DB search
MEGVSYQRFPKVKIREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS
VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFYLRVKCLSDQTLDV
TSKDLLSSDHTVVPVDYSDASSGFDSTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW
SPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPESKQVIIVEPEAYTY
DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD
DTVEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgtttcataccagagattcccaaaggtaaaaatccgtgaagttaaagacgat
ttcatgaaattcgagctccgggatacggacgccagtatagctaacgctctccggcggata
atgatagctgaagtacccaccatagccatagacctcgttgaaatcgaagtcaattcctct
gttctcaacgatgagttcatttctcatcgtttagggcttgtaccgctaacaagtgaacgc
gcgatgagcatgcgattctcacgtgactgtgatgcttgtgatggtgatggacaatgtgag
ttctgttctgttgagttttatctccgggtgaaatgtcttagtgaccagacgcttgatgtt
actagcaaggatttgttgagttctgaccatactgttgttcctgttgattattccgatgct
tcctcgggttttgatagtactcctaataagggaatcataattgtgaagctacgacgtgga
caggagttaaggttaagagctatagcccggaagggaattggcaaagatcatgcgaaatgg
tcgcctgcagcaactgtgactttcatgtatgaaccagagatctacatcaatgaggacatg
atggaatccttgactctcgaggagaaaacagaattagttgagagtagtcccacaaaagtc
ttcggcattgaccctgagagcaaacaggttattattgttgaacccgaggcatatacttat
gatgatgaggtgctcaagaaagctgaagccatgggaaaacctggacttgtagagatacat
gccaaggaagatagttttattttcactgttgagacaactggtgcagtcaaagcttcacaa
ttggtgctcaatgcaatagaagtgctgaagcagaagttggatgcagtacgtctttcagat
gacaccgtggaagcagacgatcagtttggagagttgggtgcacatatgcgcggagggtaa
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