Solanum dulcamara (climbing nightshade): 129880105
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Entry
129880105 CDS
T09577
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00531
Glycosaminoglycan degradation
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
129880105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sdul00536
]
129880105
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
129880105
Glycosaminoglycan binding proteins [BR:
sdul00536
]
Heparan sulfate / Heparin
Enzymes
129880105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
129880105
NCBI-ProteinID:
XP_055809954
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All DBs
Position
2:5961937..5965450
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AA seq
529 aa
AA seq
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MDSRTTKLFCFVLLVSSCFLNLSNSDELKVMVKGVTSIAQTDDNFICATLDWWPENKCDY
NQCPWEKVGLLNLDLKNRILANAVKAFNPLRIRIGGSLQDQVYYKVGKYPKKCSNFEKKS
DGLFGFGDGCLHMNRWDELHDMFNKTGAAITFSFNALIGRIPSEEEHTTLWVGDWNQFNA
KSLMKYTIKKGYKIDSYELGNELCGSGVAARINAQQYGNDVKKLKKLVTHMYPNPANRPK
ILAPGGFYDKKWFQEFLQTTGPGIVDGLTHHIYNLGEGVDPTLIDKLQNPFYLSQIAQTF
KNVENDAKLFSPSTGPWVGESGGAYNSGGKTTSHTFVNGFWYLDQLGMTSTFNHKVYCRQ
SLIGGNYGLLNTTTFIPNPDYYGALLWHKLMGKNVLSVTHEGSPYIRTYAHCSKTSGITV
LLINMDKSTTFDVSVVDDLNIYPDSVVSINIYPDSVESIHQREEYHLTPKDGNIQSDVLL
LNGTPLKLTSSLDIPEMNPKLVDPTLPISVAPQSIVFATLRGFQAPACA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggattcaagaacaactaagttgttttgttttgttcttttagtgtcatcatgttttctt
aatttgtctaattcagatgaattaaaagttatggtgaaaggagttacatctatagcccaa
acagatgataatttcatatgtgcaactttagattggtggccagaaaataaatgtgattat
aatcaatgtccatgggaaaaagtcggtctccttaatctggacttgaaaaacaggattctt
gcaaatgctgttaaagcattcaatccactaagaatcagaataggaggttcattgcaagat
caagtatactacaaagttggaaaataccccaaaaaatgctcaaattttgagaaaaaatct
gatggactttttggatttggtgatggctgtctccacatgaatagatgggatgaattgcat
gatatgttcaacaaaacaggggctgcaataacattttcatttaatgctttaattggaaga
ataccatcagaggaagaacatacaactctttgggttggagattggaatcaattcaatgca
aaatcattgatgaaatacactatcaaaaagggatacaaaattgactcatatgaattaggt
aatgagctttgtggaagtggagttgctgcaagaataaatgctcaacaatatggtaatgat
gtcaagaaattgaagaaacttgtcacacatatgtatcctaaccctgctaatagaccaaaa
atcttggctcctggtggattttatgataaaaaatggttccaagagttccttcaaacaacc
ggtccgggcatcgtcgatggattgacacatcatatttacaaccttggagaaggtgttgat
ccaactctgattgacaaacttcagaatccattttacctaagtcaaatagctcaaacattt
aagaatgttgaaaatgatgctaagttgttttcaccatcaactggaccttgggttggtgaa
tctggtggagcttataatagtggtggcaaaaccacttcacacaccttcgtcaacggtttc
tggtacttggatcaattgggaatgacatcaactttcaaccataaggtatactgtagacaa
tccttaattggaggaaactatggtcttctcaacacaactactttcatcccaaatccagat
tactacggtgctcttctatggcataagcttatgggaaagaatgtcctttctgttactcat
gaaggctctccctacatccgcacttacgcacattgctcaaagacaagtggtattacagta
ctactaattaacatggataagtcaactacctttgatgtctctgtggtggatgacttgaat
atataccctgatagtgttgtctctataaatatatatcctgatagtgttgagtctatacat
caaagagaagagtaccatttgactccaaaagatggcaacattcaaagtgatgtgttgttg
ctaaatggaactccattgaagctcacttcatcattggacatcccggaaatgaatcctaag
ctcgttgatccaacgttgcccatcagtgttgctcctcaatctatcgtctttgctaccttg
agagggtttcaagctcctgcttgtgcatag
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