Solanum dulcamara (climbing nightshade): 129880269
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Entry
129880269 CDS
T09577
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04144
Endocytosis
sdul04517
IgSF CAM signaling
sdul05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129880269
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129880269
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129880269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129880269
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdul04812
]
129880269
Membrane trafficking [BR:
sdul04131
]
Others
Actin-binding proteins
Arp2/3 complex
129880269
Cytoskeleton proteins [BR:
sdul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
129880269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
EIF3I
Tricorn_2nd
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
RMC1_N
Beta-prop_NUP159_NUP214
eIF2A
B-prop_COPA_B_2nd
WD40_MABP1-WDR62_2nd
Zn_ribbon_LapB
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
129880269
NCBI-ProteinID:
XP_055810203
LinkDB
All DBs
Position
2:complement(9424780..9442504)
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AA seq
374 aa
AA seq
DB search
MAATSVHKFGQCISCHAWSPDLSMIAFCPNNSEVHIYKLSEDKWEKVHVLQKHDQIVSGI
DWSYRSNKIVTVSHDRNSYVWNQETTGWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSIAWHPNNVLLATTSTDGKCRVFSTFIKGVDA
KDSAMGNSADTKFGEQIVQLDLCFCWAFGVRWSPSGNTLAYVGHNSMIYFVDEVGPSAAA
QSVAIRDLPLRDVLFLSERMVVGVGFDCNPMVFVADESGLWSFLRFLDERKAASSSAKYG
SQFSEAFGKFYGQSKLSGSNNVEQSRGAHDNCINCILPLAKQRKSSVTRFSTSGLDGKIV
TWDLQNQEDLLDYL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacttcagtacataagtttggtcagtgcatttcttgccatgcttggagtccc
gacctatccatgattgcattttgtcctaacaacagcgaagtgcatatttataaactatcc
gaagacaagtgggagaaggtccatgttcttcaaaagcatgaccaaattgtttctggtata
gattggagttacagatccaacaaaatagtcactgtttctcatgatcgtaattcctatgtt
tggaaccaagaaacgacagggtgggttcctactctggttattctcaggctgaatcgtgca
gcactttgtgtgcagtggagtccaaaagaaaacaagtttgctgttggaagtggagctaaa
actgtttgtatatgctactatgagcaagaaaataactggtgggtgagtaagcttatcagg
aaaaggcatgattcatctgtaacaagtattgcctggcatccgaataatgttctcctagca
acaacgtccactgatggtaaatgtagagtattttcaacattcattaaaggcgtcgatgca
aaagactctgcaatggggaattctgcagataccaaatttggagagcaaattgtccagctt
gacctatgcttttgctgggcttttggtgtcagatggtccccaagtggcaataccttagca
tatgtaggtcataactcaatgatatacttcgttgatgaagttggtccctctgctgcagca
caaagtgtagcaatccgtgatttgcctcttcgtgatgtattgtttctttctgaaaggatg
gttgttggagtgggatttgattgcaacccgatggtatttgtggcagatgaaagtggactc
tggagtttcttgagattccttgatgaacggaaagcagcgtcttcaagtgccaaatatgga
tcacagttttcggaagcatttgggaaattctatggtcaatcaaagctttcaggcagcaac
aacgttgagcaatcaagaggcgctcatgacaactgtatcaattgtatattaccacttgcc
aaacagagaaaatctagtgtcacccgtttcagcacttcaggacttgacgggaagatagtg
acatgggatctgcagaaccaagaagatttattggactatctatga
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