Solanum dulcamara (climbing nightshade): 129880331
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Entry
129880331 CDS
T09577
Name
(RefSeq) RNA-binding motif protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129880331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129880331
Spliceosome [BR:
sdul03041
]
Complex A
U1 snRNP components
U1 related factors
129880331
Complex B
129880331
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
P_C10
Motif
Other DBs
NCBI-GeneID:
129880331
NCBI-ProteinID:
XP_055810292
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All DBs
Position
2:11512254..11520157
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AA seq
939 aa
AA seq
DB search
MADSAPSPENPAVTNSQPPMESDIQTSQSDPSPAPSLSSPLPPPPPSIQPYSAVPTSFRP
ATPPAPLPGVGVTPMFSPLPNPNLQQQTLNFPNPSVQPPGVNSVPPAMIPAPTGGAGAVQ
MGSAPQIMPPYAMPGQMMRPYAPMPNGYHTMPQSAPQGAMLHPGIPRYASPYTQMARPVF
PPRPLGAVGIVPPLMRPQIPMIRPPIIPPVARPAAIPSITQTEKPQTTVYVGKISSTVEN
EFMLSLLQLCGPVRSWKRAQVPTNGSLKGFGFCEFESAEGVLRALRLLNKLNIDGQELML
NVNQATRDFLERRYVEKKAESSKKPKESETEGVEKEEESALGGEKNENAKTSTEPPESST
EESKQDSGDTANRENLDAANFGLVTDEDRQADKEALEKIKDMIEERLKNKPLPPPPPPPQ
TAKDGSDNSYMENVKDGEPGRDAAKNEEKNDDVSESKTSSELEKAEINSPDHRRHDRRSR
DRERDLKREKERELERYEREREQERAKREKEREYKTREDDRRYKSREKEWETREREREHW
RKREREREKERAQERKWDIVEQERECEEGYRKRKHRTSDEERKRRQREKEDDLADRAKEE
EEIAEARRRADEEQQKKEQEEALKILSGHLANGRGKAVSYEENNLDSQDKNIERAQDNLS
QGEGVAQNGTDEESVLAATAASDMRHNSNAPTKRLEFGLLGSGKRAAVLSFFNADEDEDT
QKEKKMRPLVPIDYSVDEQHMVQPSSETSPTMAAEFAKRISNVNSKEERSDVEKERHRRT
HDRSSQRDRDRHDEETNRTRDDSRNLDHDRVREPRPDKVKTPDNQKLLDAKQLIDMIPKT
KDELFSYEINWAIYDKNALHERMRPWISKKITDFLGEEEPTLVDYIVSSTQEHVKATEML
ERLQSILDEEAEMFVLKMWRMLIFEIKKVETGLALRPKS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcagctccttcgccggaaaatcccgccgtcactaattctcaaccaccgatg
gaatccgatatccaaacttcccaatcagatccatctccggcaccgtcgttatcttcacct
ctgccaccacctccgccgtcgatccagccttactccgccgtacctacgtcgtttcgtcca
gcgacgcctccagcacctctacctggtgttggtgtaactcctatgttctcgcctcttcct
aaccctaacttgcagcagcaaacattgaattttccgaatccttctgttcagcctcctgga
gtgaattctgtgccgccggcgatgattccggcacctacaggtggtgctggagctgttcag
atgggttcggcgccgcaaattatgccgccttatgctatgcctggacagatgatgagaccg
tacgcccccatgcctaacggttaccatactatgcctcaatctgctccacagggcgccatg
cttcatcccggaattccgcgttatgcatcaccatacacacaaatggctcggccagtgttt
cctccacgcccactaggtgcagtaggcattgttcctcccttgatgcgccctcaaatccct
atgatacgtcctccaatcattcctcctgttgctaggccagctgccattccaagcattact
caaacagagaaaccacaaacaacagtttatgttggcaagatatcttccactgtggaaaat
gagtttatgctttctcttttgcagctctgcgggcctgttaggagttggaagcgtgctcaa
gttccgacaaatggatcactgaaaggttttgggttttgtgagttcgagtctgctgagggg
gttctccgtgcattaaggttgctcaacaaattaaacatcgatgggcaggagctgatgtta
aatgtcaatcaagcaactcgtgatttccttgaacggcggtatgttgaaaagaaagcagaa
agctcaaagaagcccaaagagtctgaaacagaaggcgttgagaaagaagaagaaagtgca
ttaggtggggagaagaatgaaaatgcgaagacgtctacagaacctccagagtctagtaca
gaagaatcaaagcaagatagtggtgatacagcgaacagagaaaatctcgatgctgctaac
tttggtttggtcactgacgaagataggcaagctgacaaagaggccttggagaagatcaag
gatatgatagaggaaaggctgaagaataaaccattaccacctccacctcctcctccacaa
acagctaaagatggttctgataactcatatatggaaaacgtcaaagatggggaacctggt
agagatgcagcaaaaaatgaagaaaaaaatgatgatgtcagtgaaagtaaaacttcaagt
gaacttgagaaggctgagattaactcaccggaccatcgtaggcatgataggagaagcagg
gatcgggagagggatttgaagagagaaaaggaaagggaactcgaaaggtatgagagagaa
cgtgaacaagaacgagccaagagagagaaggagagagagtacaagacccgcgaagatgac
cgtaggtacaagtcccgagaaaaagagtgggaaacaagagaaagggagagggaacattgg
cgaaaaagggagagagaaagggagaaagaaagggctcaggaacgcaaatgggatatagtg
gagcaagaacgtgaatgtgaagagggttatagaaaaaggaaacacaggactagtgacgag
gagaggaaaagacggcagagggagaaggaagatgacttggccgacagggctaaagaagaa
gaagagattgctgaggctaggagaagagcagacgaggaacagcagaaaaaagagcaggag
gaggcactgaaaatcctttctggtcatctagctaatggacgcggaaaagctgtttcatat
gaggaaaacaatcttgatagccaagataagaatatcgagagagctcaggataatttaagc
cagggtgaaggagttgcacaaaatgggactgatgaagaatccgtgttggcagctactgct
gcatcggatatgaggcataatagcaatgcccctacaaaaaggttagaatttggcctccta
gggtcggggaaaagagctgctgtcctttctttcttcaatgcggatgaggatgaggatact
caaaaagaaaagaaaatgaggccattggttccaattgactactcagttgacgagcaacat
atggtccaaccttcctctgaaacatcgccgactatggctgcagaatttgctaagcgaatt
tcaaatgtcaactctaaagaagagaggtctgatgtagagaaggagagacacagaagaact
catgacagatccagccagagggatcgggacaggcatgacgaggagactaaccgaaccagg
gatgacagcagaaaccttgatcatgacagagttcgggaacctagacctgataaggttaag
acgcctgataatcagaagcttttagatgcaaagcaattgattgacatgattccaaagacc
aaggatgagttgttctcttatgagataaactgggctatttatgacaagaatgcgttgcat
gaaaggatgagaccgtggatcagtaagaagatcactgattttcttggtgaggaggaaccg
acactggtagactacatcgtctccagcacgcaagaacatgtcaaggcaactgaaatgctg
gagagactccaaagtatattagatgaagaagctgaaatgtttgttctgaagatgtggagg
atgcttatatttgaaattaagaaagttgagacaggtttggctttgaggcccaaatcctag
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