Solanum dulcamara (climbing nightshade): 129880334
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Entry
129880334 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129880334
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129880334
Enzymes [BR:
sdul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
129880334
Ribosome biogenesis [BR:
sdul03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
129880334
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
DUF5703
Motif
Other DBs
NCBI-GeneID:
129880334
NCBI-ProteinID:
XP_055810299
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All DBs
Position
2:complement(11555979..11563789)
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AA seq
452 aa
AA seq
DB search
MRRIRFSGGGSCALLGTTFPFSNHTNFPLKPKSFLKLLPSRTPLIFTTPHYRLVTAAQHS
STSHVLPTPQTKPSGGDGRNGCPLKDSKVVLKGMRYTDLEKWVQSHGYRPAQALMLWKRL
YGDNIWAQCSEELEGLNKDFRKMLGEHAEFKTLNLKEILTASDGTKKMLFQLEDGLVIET
VLIPCERGRNTVCISSQVGCAMNCQFCYTGRMGLKRNLSTSEIVEQAVLARRLLASEVGP
ISNVVFMGMGEPLHNIENVLKAADILVDEQGLHFSPRKVTVSTSGLVPQLKRFLRESNCA
LAVSLNATTDEVRSWIMPINRKFNLNLLLGTLREELQSKHKYKVLFEYVMLAGVNDSVED
AKRLIDLVQGIPCKINLITFNPHSGSFFKPTKREKIIEFRNILAEAGCVVLFRWSRGDDQ
MAACGQLGKPGEIQAPVLRVPSQFQAVLEAAA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaattcgtttttccggcggcggcagctgtgctctgcttggaacaacttttccc
ttctcaaatcacacaaattttccattaaaacccaaatcttttctaaagctgcttccttca
agaacacccctcatcttcaccactccccattatcgtttggttacagcagctcaacattct
tctacctctcacgttctcccaacaccccaaactaaaccttctggaggtgatggccgaaat
gggtgtccactgaaggactcaaaagtcgttttgaaagggatgagatatactgatcttgag
aaatgggttcagtcacatggttataggcctgctcaggctctgatgttatggaaacgtctg
tatggggataatatttgggcgcaatgcagtgaggaattagaaggtttgaataaagatttc
aggaaaatgttgggtgaacatgctgaatttaagacgttaaacttgaaagaaattctgaca
gcttctgatggaactaaaaagatgttattccagttggaagatggtctggtaatagaaact
gttctgataccttgtgagcggggcaggaatactgtctgcatatctagtcaagtaggttgt
gccatgaattgccagttttgctacactggcagaatgggtctgaagagaaacttatccact
tctgagatagttgagcaggctgttttagctcgacggttgttagccagtgaagttgggcca
attagcaatgttgtatttatgggaatgggagaaccacttcacaacattgagaatgtctta
aaagctgcagacatattggtagatgaacaagggcttcattttagtcctcgaaaggtcacc
gtttctacaagtgggcttgtgccccaacttaagcgatttcttcgtgagtccaattgtgct
ttggcagtcagtttgaatgctacaactgatgaggtcagaagttggatcatgccaattaac
cgcaaatttaacttgaacttgcttcttggaacactaagagaggagcttcaatcaaaacat
aagtacaaagttctgtttgagtatgtaatgcttgctggagttaatgatagtgttgaggat
gcaaagagattaatcgatcttgtccagggcattccatgcaagattaacctgatcactttt
aaccctcattctggatccttcttcaaaccgactaaaagagagaagataattgagttcaga
aatattcttgctgaagcaggatgtgtggtgctttttcgatggagtagaggagacgatcaa
atggctgcctgtggtcagttaggtaaaccaggtgaaatccaagctcccgtgcttcgagtg
ccttctcaatttcaagcagtattggaagctgcagcatga
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