Solanum dulcamara (climbing nightshade): 129880407
Help
Entry
129880407 CDS
T09577
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
sdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129880407
03015 mRNA surveillance pathway
129880407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129880407
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129880407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
129880407
NCBI-ProteinID:
XP_055810406
LinkDB
All DBs
Position
2:complement(18587508..18610440)
Genome browser
AA seq
645 aa
AA seq
DB search
MGAVKLQLPLPKSVDGVTLDPNPDWTFDTLLVELNSIEKKLNASSKFPIPFTKTESRQLS
ASKDNSRRGFVMQVSDDDVEDMDRDTKHEVDDHFLMGGKRFACDEIFLSDSDQSEEGLNI
EHQCDLMDKVGYVESALSELAHDHQLTVAEEMRDQLSALEAELMDESEKLASTLERVERN
TEAQREMNRKFDMQYQRKIAEALDDHLTTVQRDHEHRSQIEERRIRDDAAREEAKRKDKA
LQEEKARQERIRAEAKVQARLEAERVEKEKAAALEAERKAAKEAAAASEKESSESLTTAP
SEASKVSRDVTSQPVRPISDGQKHSAGNTIRVTENAQKLEEKRLAVYNELAAQNEALGLG
SNKAYRKCEMEIARRIRTITGSKENVRVKADELIKLISGSTCPQSISIAMFAQKVVYLCV
NPTGSFNSAVYAYGRVIVHVTSKVPLAMDILIAELNKICIYTVPKYIIYSEAAFQSKEAY
YKAIGYAEEDGKIESTDSYVDRLSAYMKLYGALVQTEVDGCQNLHGLREGWAWIARFLNV
FPANLYTAAALQAFLEMAGFALHKRYKTQFRKLMDIIARDFLTALKDRGDAKLIKVIVNL
RSYIESNQFLNEPEGWRLRSSLESHNFTPDSDHDQQYRYQQNRFY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgttaaactgcaacttccgttgcctaaaagtgttgatggggtcaccctggat
ccaaatcctgattggaccttcgatactttattggttgagctcaattcgattgagaagaag
ctcaatgcatcatcaaaatttccaataccttttacaaaaacagaatctcgacaactctcg
gcttcaaaggataattctcggagaggctttgttatgcaagtgtctgatgacgacgtggag
gatatggacagagatactaagcatgaagttgatgatcattttcttatgggaggaaaacgt
tttgcctgtgacgaaatctttctgagtgatagcgaccaatctgaagaaggcctaaacatc
gaacatcaatgtgatctaatggataaagtgggatacgtggaaagtgctttatctgagtta
gctcatgaccatcagcttactgttgcggaggaaatgagagatcaactatcagcacttgaa
gctgagttgatggatgaaagtgagaagcttgcctccacactagaaagagttgagagaaac
actgaagctcaaagggaaatgaacagaaaattcgacatgcagtaccaacgtaaaattgca
gaagcacttgatgatcacctaactaccgtacaaagggatcacgaacacagatcccaaatt
gaagaaaggagaataagagatgatgcagctcgtgaagaggccaagaggaaagacaaagct
cttcaagaagaaaaagcccggcaagaaaggattagagcagaagccaaggtgcaggctagg
ctggaagctgaaagagttgaaaaggaaaaagccgcagcactggaagctgagaggaaagca
gcaaaagaagctgcagctgcgtcggagaaggagtcatctgagtcattgacgactgctcct
tcggaggctagcaaggtttcaagggatgtcactagtcagcctgtgagacccatatctgat
gggcagaaacattcagcaggaaatacaatcagggtgacagaaaatgctcaaaaactggag
gagaaaagattggccgtttacaatgaactagctgcgcagaatgaagcactgggattgggt
tcaaacaaggcttaccgaaaatgtgaaatggaaatagccagacgaatcagaactatcact
ggttcaaaagaaaatgtcagagtgaaagcagatgaattaattaagctaattagtggttca
acatgtccacaatccattagcattgcaatgttcgcgcagaaggtggtgtatctgtgtgtg
aaccctacaggaagctttaacagtgcagtctatgcttatggtcgtgtaattgtccatgtt
acatcaaaggtccctcttgccatggacattctcatagccgagttgaacaaaatttgcatt
tacacagttcctaagtacattatttactcagaggcagccttccagtctaaagaagcttat
tacaaagctattggctatgcagaggaagatgggaagatagaaagtactgatagttatgtg
gatcgcttaagtgcatacatgaaattatatggtgctcttgttcagactgaagttgatggc
tgccaaaacttgcatggcctcagagaaggttgggcatggatagccagattcttaaatgtt
ttccctgcaaatttatacaccgcagctgcattgcaggcttttcttgaaatggcaggtttt
gctctacacaaaagatataagacacaattcagaaagctgatggatatcatagctagagat
tttctaactgcattgaaggatcgaggcgatgcaaagttgatcaaagtgattgtgaatctc
cggagttatatagagtcaaatcagttcctgaatgaacccgagggctggcgcctcaggagt
tccttggagtcacacaatttcactccagattcagatcatgatcaacagtatcgttaccaa
cagaatagattctattag
DBGET
integrated database retrieval system
