Solanum dulcamara (climbing nightshade): 129880418
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Entry
129880418 CDS
T09577
Name
(RefSeq) T-complex protein 1 subunit epsilon-like
KO
K09497
T-complex protein 1 subunit epsilon
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sdul03110
]
129880418
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sdul03037
]
129880418
04147 Exosome [BR:
sdul04147
]
129880418
Chaperones and folding catalysts [BR:
sdul03110
]
Heat shock proteins
HSP60 / Chaperonin
129880418
Cilium and associated proteins [BR:
sdul03037
]
Primary cilia and associated proteins
BBS-CCT complex
129880418
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129880418
Exosomal proteins of colorectal cancer cells
129880418
Exosomal proteins of bladder cancer cells
129880418
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Toxin_27
Motif
Other DBs
NCBI-GeneID:
129880418
NCBI-ProteinID:
XP_055810422
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All DBs
Position
2:20076360..20083355
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AA seq
535 aa
AA seq
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MALAFDEFGRPFIILREQEQKTRLRGLDAQKANISAGKAVARILRTSLGPKGMDKMLQSP
DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAEKLL
ERGIHPIRIAEGYEMASRIAVEHLERVAHKYKFSLNDVEPLVQTCMTTLSSKIVNRCKRR
MAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIIVDKDMSHPQMPKQIE
DAKIAILTCAFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW
GFDDEANHLLMHRNMPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGIVREKSF
GTTKDRMIYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
AEISCSIAVEAAADKHPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE
NNPCCGIDCNDVGTNDMREQNVFETLIGKQQQIMLATQVVKMILKIDDVISPSEY
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgttagctttcgatgaattcggaaggccgtttataatactcagggagcaagaacag
aaaactagattaagaggcctcgatgctcagaaggcgaacatttccgccggaaaagctgtt
gcacgtattttgcgtacttcacttggtcctaaaggcatggataagatgcttcagagcccc
gacggcgatgtcaccatcacaaatgatggtgccaccattttggagcagatggatgttgac
aatcagattgcaaagttgatggttgagttgtcccgaagtcaagattatgaaattggcgat
ggaaccactggagttgttgtcatggctggggcacttttagaacaagctgagaagttgtta
gaacgtggtattcatcctattcggattgcagaagggtatgaaatggcttcaaggattgca
gttgaacatttggagcgtgtagcacataaatacaaattcagtctgaatgatgttgagcct
ttggttcaaacttgcatgactactttgtcatctaagattgtgaatagatgcaaacgtagg
atggctgaaattgctgttaaagctgttttagcagttgctgatttagagaggaaggatgta
aacctggacttaatcaaagttgaaggaaaagttggtgggaaattagaggacacggagcta
atttatggtattatagttgacaaagatatgagtcatccacagatgccaaagcaaattgag
gatgccaaaattgcaattttgacatgtgcttttgagcctcctaagccaaagactaagcat
aaggttgacattgatactgtggagaagtttcaaaccttacgcttgcaggagcagaagtac
tttgatgacatggttcagaagtgcaaggatgttggtgccaccttagttatctgccagtgg
ggttttgatgatgaagctaatcacttattgatgcatagaaatatgcctgctgttagatgg
gtaggtggtgtggaattggagctgatagcaattgccacaggtgggagaatagttcctagg
tttcaagagttgacacctgaaaaacttggcaaggctggtattgttcgggagaaatccttc
ggtacaacaaaggatagaatgatttacattgagcattgtgcaaattccagagcagttact
atatttatccgtggtggcaacaagatgatgatagaggagacaaaacgtagtatccatgat
gctctatgtgttgctagaaatcttattcgcaacaattcaattgtatatggtggtggttca
gcagagatttcttgctcaattgctgttgaagcggctgcagataaacacccaggagttgaa
cagtatgcaatcagggcatttgcagatgctttggattctgtcccaatggcacttgctgag
aacagtggcctccagcccattgaaactctatctgctgttaagtctcagcaaattaaggag
aataatccctgttgtggaattgattgtaatgatgttggcacaaatgacatgcgtgagcaa
aatgtgtttgagactctaattgggaagcaacaacagataatgcttgcaactcaggttgtc
aagatgatcctaaagattgatgatgtgatttctccctccgagtattga
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