Solanum dulcamara (climbing nightshade): 129880518
Help
Entry
129880518 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129880518
03036 Chromosome and associated proteins [BR:
sdul03036
]
129880518
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129880518
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129880518
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
129880518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
PHD
zf-RING_5
zf-RING_6
Prok-RING_4
zf-RING_4
RING_XB3-XBAT31
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
129880518
NCBI-ProteinID:
XP_055810569
LinkDB
All DBs
Position
2:39771439..39776357
Genome browser
AA seq
682 aa
AA seq
DB search
MAHDSDLPCDGDGVCMACKTKPSENESLICNTCATPWHVNCLSAPPDSMADAVNWECPDC
SLSPDAPVKQNAAASSSSGDLIAAIRAIESDSSLTEQEKAKRRQELLSGGSKDTTLEGVN
PDNDVLNILDGSLNCSMCMQLPERPVTTPCGHNFCLKCFQKWVGQRKSTCANCRTPIPAK
MASQPRINSALVIAIRMARMLRSGTSGGTSKVAHFIHNQNRPDKAFTTERAKKTGKANAC
SGKIFVTIPGDHFGPISADNDPERNLGVLVGETWEDRFECRQWGAHFPHVAGIAGQSDYG
AQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKLQSFDQKFDKLNEALRVSCLKG
YPVRVVRSHKEKRSSYAPDKGVRYDGVYRIEKCWRKAGKQGFKVCRYLFVRCDNEPAPWT
SDEHGDRPRALPPIKELKGATDMTERKGAPAWDYDEEKSCWMWKKAPPPSRKPVQCENED
GTKVRKVRPKRHTMSVKQRLLKEFSCLLCREVMNHPLTTPCAHNFCKACLNGAFAGQSFT
RQRTCEGRRTLRAQKNIMKCPSCPTDISDFLQNPQINRELMNVIESLKQQIEEESAALSA
DVDDGGLDGNDEILADEAVETDKSVEDDKGAQPVNENETKQTHKRKRSNSIDNVSPKKSI
DKSDKHNLEEFDSAIPEFSVCE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgatagcgatctcccatgcgacggcgatggcgtctgtatggcctgcaaaacg
aagccatctgagaacgaatccctcatctgcaacacttgtgccactccctggcacgtcaat
tgcctctctgctcctcccgattccatggccgacgccgtcaactgggagtgtcctgactgc
tccttgtctcccgatgcccccgttaaacagaatgccgctgcttcctcctcctccggcgac
ttgatcgccgctattcgagccattgaatctgattcctcgctcaccgagcaggagaaggcc
aagcgacgacaagagctcttgagcggaggctccaaagacactactctcgagggggttaat
ccagacaacgatgtgctaaatattctcgatggaagtttgaactgctctatgtgcatgcaa
ctgccagagagacctgtcacgacaccttgtggtcataatttttgcctgaagtgcttccaa
aagtgggttggacagcggaagagtacctgtgctaactgtcgcactcctattccagctaaa
atggcaagccagcctcgaattaactctgctctggtcattgccataagaatggcaagaatg
ctacggtctggtacctctggtgggacctcaaaagttgcacatttcattcacaaccaaaat
agacctgacaaagctttcaccactgagcgtgcaaaaaagactgggaaggctaatgcttgc
agtgggaagatttttgttacaatccctggtgaccattttggaccaatttcagcagacaat
gatccagagcgcaacttgggtgttttggttggtgagacttgggaggatcgttttgagtgt
cggcaatggggggctcatttccctcatgtggctggtattgcagggcagtcagattatggg
gcccagtctgttgcactttctggagggtatgaagatgatgaggaccatggtgaatggttt
ctgtatactggaagtggtggaagagacttgagtggtaacaagcgtacaaacaagctacaa
tcgtttgaccagaaatttgacaagcttaatgaagctttacgtgtcagctgtctcaagggt
tatcctgtccgagttgtgaggtcccacaaggagaaacgctcttcgtatgcaccagataaa
ggagtacgatacgatggggtctacaggattgaaaagtgttggcggaaagctggaaaacaa
ggattcaaagtttgtcgatacctttttgtgcgctgtgataatgaacctgcaccatggacc
agtgatgaacatggggaccgtcctagggccttgcctcccatcaaagaactaaaaggtgcc
acagatatgactgagagaaaaggagctccagcctgggattatgatgaggaaaagagttgc
tggatgtggaaaaaggctcctcctcctagtaggaaaccagttcaatgtgaaaatgaagat
ggaacaaaagtgagaaaagttagaccaaagagacatacaatgtctgtaaagcagaggctc
ttgaaagagtttagttgtcttctttgtcgggaagtgatgaatcacccgcttaccactcca
tgtgctcacaacttctgcaaggcatgtttgaatggtgcctttgcagggcaatcttttaca
agacagaggacatgtgaaggcagacgtacattacgagcccagaaaaatataatgaaatgc
ccgtcgtgtccaactgatatatctgatttcctccagaatccccagattaatagagagttg
atgaatgtgatagaatcactgaagcaacaaattgaggaagaaagtgcagcattaagtgct
gatgttgatgatggtggcttggatggaaacgacgagattctggctgatgaagctgttgaa
acagataaaagtgtggaggatgataaaggtgcacagcctgtcaatgagaatgaaaccaag
cagacccacaaaaggaagagatccaatagtattgacaatgtatcaccgaaaaaatccatt
gacaaatctgataagcataatcttgaggaatttgattctgccatacctgaattttcagtt
tgcgagtag
DBGET
integrated database retrieval system
