Solanum dulcamara (climbing nightshade): 129880530
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Entry
129880530 CDS
T09577
Name
(RefSeq) eukaryotic initiation factor 4A-15
KO
K03257
translation initiation factor 4A
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129880530
03012 Translation factors [BR:
sdul03012
]
129880530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129880530
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129880530
mRNA cycle factors
Stress granule specific factors
129880530
Translation factors [BR:
sdul03012
]
Eukaryotic type
Initiation factors
eIF-4
129880530
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129880530
Exosomal proteins of bladder cancer cells
129880530
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DUF2780
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
129880530
NCBI-ProteinID:
XP_055810586
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All DBs
Position
2:complement(43266915..43271086)
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AA seq
414 aa
AA seq
DB search
MAGAAPEGSQFDARQFDSKMNELLSADDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYG
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELLECQALVLAPTRE
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLR
PDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPV
RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ
PENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDIQRFYNVVIEELPANVADLL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgcagctccagaaggatcacagtttgatgctcgtcaattcgactcaaaaatg
aatgaattgctttcagctgatgatgggcaggatttctttacgtcatacgatgaggtttat
gatagttttgatgccatgggtttgcaggagaaccttctcaggggcatttatgcatacggt
tttgagaaaccctcagcaatccagcaaagaggaattgtacccttttgcaaaggtcttgat
gtgattcaacaggctcagtctggaactgggaagactgccacattttgttctggaattctg
cagcaacttaactatgaacttctggaatgtcaagctttggtcttggcacctactcgggag
cttgcacaacaaattgaaaaggtcatgagggcacttggtgactaccttggtgtgaaggta
catgcctgtgtgggaggaaccagcgttcgggaggatcaacgcatcctttcaagtggtgtt
catgttgttgtgggaacgcctggacgtgtatttgacatgctgagaagacagtcacttcgc
cctgatcatataaagatgtttgtattggatgaggctgatgaaatgctttccagaggcttc
aaggatcagatctatgatattttccagctcttgcctcctaagattcaggttggtgtcttc
tctgctactatgcctcctgaggcacttgaaatcacaagaaaattcatgaacaaacctgtg
aggattcttgtgaagcgtgatgagctgaccttagaaggtatcaagcagttctatgtgaat
gtggacaaggaagaatggaagcttgaaaccctgtgcgacctgtatgaaacattagccatt
acacagagtgtgatctttgtgaatactcgtcgcaaagttgactggttgacagacaagatg
cgaagcagagatcacacagtgtcagctacccatggtgacatggaccagaacactagagat
attataatgcgtgaattccgttctgggtcctcccgcgttctcatcaccactgatcttttg
gcacgaggaatcgatgtccaacaggtctccctggtcataaattatgatctccccactcag
cctgagaattatcttcatcgtattggacgcagtggaaggtttggtaggaagggtgtggcc
atcaactttgtaactaaggatgatgagaggatgctgtctgatattcagaggttttacaac
gttgttattgaggagctgccagcaaatgttgctgatctcctgtaa
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