Solanum dulcamara (climbing nightshade): 129880604
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Entry
129880604 CDS
T09577
Name
(RefSeq) YTH domain-containing protein ECT1-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129880604
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129880604
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
TraG-D_C
Motif
Other DBs
NCBI-GeneID:
129880604
NCBI-ProteinID:
XP_055810671
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Position
2:complement(60936349..60946085)
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AA seq
611 aa
AA seq
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MEDTNHQSIDRFTSASSSGERVVEPHNAAEQPISPKDERIGSANASPDAAIPGASRIAQD
HPVTSETGALPTFYPLNSYSPQDQGLYYGGYDNGTGSWVEQSNDVNVNNLHVVPPGMYNE
NPLFFPPGYGFDPQMAFGQFSPIASPLSPFMIDGQLYSHQIPVSPSYYAPPVSPGLPHVT
SALPASQPDLVAPGSTGHEIDGTQFGPGSGYYIPVGPFGGGDLSGSSNMGFYNYQGEVGS
GQSLPNRPNPVDSGRYMSQMTSAGLYPQPVGILGSYEQNAMQQASHQGLGFTSGSSSRHY
SQGGLYPSANYGSGSSSLWEPGHRNWLTPDRGGRRERDRHSVSISTESLGMASERNRGPR
ALKPKSKAPIEDSSSSVIRTEVELTSILQPDQYNRPEFVTDYEHAKFFVIKSFSEDNVHK
SIKYSVWASTPQGNRKLDAAYGEAKEMNANCPVFLFFSVNASGQFCGVAEMVGPIDFENN
AEYWQQDRWSGQFPVKWHVIKDVPNSQFRHILLEHNDNKPVTHSRDSQEVKLPEGLEMLK
IFKNYEADTSILDDFTYYDEREKSLLEKKSKQRPLPPGSAAVAVTTAADTISQLADSLAG
TLNLEGNKKLP
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaggataccaatcaccagagcatcgatcgattcacatctgcctcatcttcaggtgaa
agagtcgtggagccgcataatgctgcagaacagcctatttcgcccaaagatgaaaggatc
ggttctgcaaatgcttctccagatgcagccatccctggggcttcaagaattgctcaagat
caccctgttacctctgaaactggagctctacccaccttttatccactcaattcctattct
cctcaggaccaaggtctttactatggaggttatgacaatggcacggggagttgggttgaa
caatctaatgatgtcaacgtgaacaacttgcatgttgttccaccagggatgtacaatgaa
aatccgctctttttccctcctggttatggctttgatccacagatggcatttggacagttc
tcccccattgctagcccactttctcctttcatgatagatggtcagctatactcgcaccaa
attccagtttctccatcttactatgcaccacctgtttcccctggcttgccacatgttaca
tcagctcttccagcttcacagcctgatctggtggcaccaggaagcactggccatgaaatt
gatggcacacagtttggtccaggatcaggttactacatacctgttgggccgtttggtgga
ggtgatctctcaggaagcagcaacatgggtttctacaattaccaaggtgaagttggatct
ggtcaatctttacctaatcgacctaaccccgtggactctggaagatacatgtctcaaatg
acatctgcaggactgtatccacagccagttggcatacttggatcgtatgagcaaaatgcc
atgcagcaggcttcacatcaaggccttggatttacatcaggttcctcatccaggcattat
tcccaaggcggtctttatcctagtgcgaactatggtagtgggtccagttctttgtgggaa
cctggtcacagaaattggctgactccagacagaggtggaagacgtgaaagggatcggcac
tctgtcagcatttccactgaatcgcttggtatggcaagtgaacgaaatcgaggaccaagg
gcattaaagccaaagagcaaggctcctattgaggatagctcgtcttctgttattcgtaca
gaagttgagttaacttctattttgcagcctgaccagtacaatcggcctgaatttgtgact
gattatgagcatgctaaattctttgtcatcaagtccttcagtgaagataatgttcacaaa
agtatcaaatatagtgtctgggctagcactcctcagggaaatagaaagcttgatgctgct
tatggtgaagcaaaagagatgaatgctaattgtcctgtttttctctttttttcggtcaat
gctagtggacaattttgtggggttgctgagatggttggacctattgattttgagaacaac
gcagagtactggcagcaggaccgatggagtgggcaatttcctgttaaatggcatgtcatt
aaggacgttcctaacagtcagtttcgtcacatacttctggaacataatgacaacaagcca
gtgactcacagccgagattctcaggaggtgaaattgccagagggattagaaatgttgaaa
attttcaagaactatgaagcagatacctctatcttggatgatttcacttattacgatgag
agggagaagtccttgcttgaaaagaagagtaaacagcgtccacttccacctggtagtgct
gcagttgcagttactactgcagctgacacaataagtcaactagccgatagtcttgctggc
acactaaacttggaaggcaacaagaagttgccttga
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