Solanum dulcamara (climbing nightshade): 129880683
Help
Entry
129880683 CDS
T09577
Name
(RefSeq) exosome complex component RRP45A-like isoform X1
KO
K03678
exosome complex component RRP45
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129880683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129880683
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129880683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
129880683
NCBI-ProteinID:
XP_055810810
LinkDB
All DBs
Position
2:complement(71430695..71446109)
Genome browser
AA seq
435 aa
AA seq
DB search
MEQRLGIIWRMTVNEKKFIESALESELRVDGRRPFDYRTLTIKFGREDGSSEVQLGQTHI
MSFVTSQLVQPYRDRPNEGTLSVFTEFSPMADPSFEAGRPSESAVELGRIIDRGLRESRA
VDTESLCVVAGKWVWSIRIDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGDDGQEV
TLHPPEVREPLPLIIHHLPIAVTFAFIGDEHMVIDPTHHEEAVMGGRMSVTLNANGDVCA
IQKAGGHGVMQSVVMQCLRIASVKAGDITSKIKTVVESYKTERALRMVKRHAPSNAVDVN
EPGEKGQKLKSEECSKSDDMDVQQGRINKRSAKNRSLTGGPSSWDPYSEGVNTDELKATL
ASRGSIAVPMNLDNLGDNIRDETKSDEPLSDVNPVSSSTDSAGKEMAISREKTLQDAVKP
KNKRKKKKSSNIATV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaagattgggaattatatggcgaatgacagtgaatgagaagaagttcatagaa
tctgctttagaatctgaactcagagtcgatggtcgccgtccatttgattatcgaaccctc
accatcaagttcggcagagaagatggttcatcagaagttcaactagggcaaactcatatt
atgagctttgttacgtcgcaactagtgcaaccttatcgagatcgaccaaatgaaggaacc
ctttcagtatttactgagttttcaccaatggcagatccttcgtttgaggcaggtcgtcct
tcagagtctgctgttgagttgggtcgcataattgacagagggttaagggaaagtagggct
gtcgacactgaatcactctgtgttgtggctgggaagtgggtctggtcaattcgtattgat
ctccatattttggacaatggaggtaatcttgttgatgctgccaatattgctgctttagct
gcacttttgacatttcggaggcctgaatgtacactaggaggagatgacgggcaggaggtg
acactgcatccacccgaggtgagggagccacttcccttgattatacaccatctacctata
gcagtaacttttgcatttattggagatgagcatatggtcatagatccaacacatcatgaa
gaagctgttatgggaggaagaatgtccgttaccctgaatgcaaatggcgatgtatgtgct
attcaaaaagctggaggacatggtgtcatgcaaagtgttgtcatgcagtgtctacgcata
gcatcagtaaaagccggagatataactagcaaaattaaaaccgttgttgaatcttataaa
acagagagagctctcagaatggtcaagcgacatgctcctagtaatgctgttgatgtcaat
gaaccaggtgaaaaggggcaaaaattgaaatcagaagagtgcagtaagagcgatgacatg
gatgtccagcagggtagaatcaacaagaggagtgctaagaaccggagtttaacaggcggg
ccgtccagttgggatccatattctgagggtgtcaacaccgacgaattgaaagctactctt
gcttctcgtggttcaatagcagtgcctatgaatctagacaatttaggtgataatattaga
gatgaaacaaaatcagatgaaccactttcagatgttaatccagtatcttcatcgactgac
tcagctggaaaagaaatggcaataagcagagaaaaaactttacaagatgctgttaagcct
aagaacaagcggaaaaagaagaaatcgtctaatattgccacagtttag
DBGET
integrated database retrieval system
