Solanum dulcamara (climbing nightshade): 129880722
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Entry
129880722 CDS
T09577
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129880722
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129880722
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129880722
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
129880722
NCBI-ProteinID:
XP_055810874
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Position
2:74165810..74172069
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AA seq
643 aa
AA seq
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MINLKQDKYVKRSLKRRVERGSERISSRRKPIRVHRLTEKPTKDQSVESNKKVLDPRDQF
LQRWNRVFILACVFAVSLDPLFFYIPVIDNKNKCLDLDKTLKITACVLRSITDLFYIFHI
ILKFRTGFFRPSSLVFGRVELIEDSSAIAKRYLFSYFIVDVVAVLPLPQIVILIIAPNMN
GPIALATKTMLKIVIFAQYVPRLFRIYPLSKEIERTIGFFNESAWGGAVFNLFLYMLCSN
VLGAFWYLFSIERQDTCWRRACDKIPNCLSDYLYCGEKMNGNSFLLNSSCPLLQQEDIKD
PNVFDFGIALDALQFQIVEKRKFRTKLLYCFWWGLRNLSSLGQNLKTSTFDGDIIFSIFI
SIIGLILFSLIIGNMQKFMQSNLVRVEEMRLRRRDVEQWMSHRMLPDNLRERITRHEQYK
WQETKGVEEESLIQNLPRDLRRDLKRHLCWSLLERVPIFAKMDKQLLDVLCERLKPALFT
EKSFIIREGDPVEEMLFLMRGTLLTMTTNGGRTGFFNSVHLKVGDFCGDELLPWALDPHP
SSSILPISTRTVQAVTDIEVFALTADDLKFVTSKFGCLYSKQLQHTYRFFSQQWRTWAAC
FIQVAWHRHCRNKLGKSLREEEDRLQATLAKESTNAPSLGATI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgataaatctcaagcaggataaatatgttaaaagaagccttaaaagaagggttgagagg
ggttctgaaagaataagtagcaggagaaaaccaattcgcgtccatcgtctaactgaaaag
ccaacaaaagatcaatctgtcgaatcaaataagaaagttcttgatcctcgagatcaattt
cttcagcgatggaacagggtgtttatattggcttgtgtatttgcggtgtcacttgatccg
ttgttcttctacattcctgtcattgataacaaaaataagtgcctagatttggacaagacg
ttaaagatcactgcttgcgttctgcgttctatcactgatcttttctatatctttcacatt
atcttgaaatttcgtactggcttctttcgtccttcttctctagtttttggaagggttgag
ttgattgaagattcctctgctatagccaagcgatatttgttttcttatttcatcgttgac
gttgtagcagtccttccactcccacagattgtaatattgattatcgctcccaacatgaat
ggccccattgctctggcaacgaaaacaatgttgaagattgtaatttttgctcaatatgtt
ccaagactttttagaatttatccattgtccaaagaaatagaaaggactataggtttcttt
aatgaaagtgcatggggtggagctgttttcaaccttttcctctacatgttgtgcagtaat
gtacttggagccttttggtatttgttctcaatagaacgtcaagatacatgctggcgccgt
gcgtgtgacaagatccccaactgtttatcagactacttatattgcggagaaaaaatgaat
ggaaattctttcttactgaattcttcttgccctctcctccaacaagaagatataaaagat
ccaaatgtctttgattttggaatcgcccttgatgctcttcagtttcagattgtggaaaaa
agaaaattccggacaaaacttttgtattgcttttggtgggggctgagaaacttaagttct
cttggccaaaaccttaagacaagcacctttgatggagatattatcttctccatcttcatc
tcaattattgggcttatcttgttttccttgattattggcaatatgcagaaatttatgcaa
tctaacctggttagagtagaagagatgagactgagaaggcgggatgtagaacagtggatg
tctcatcgcatgcttcctgacaatctgagagagcgaattactagacatgaacagtacaaa
tggcaagaaaccaagggagttgaggaagaatcactcattcaaaatcttccaagagacttg
aggagagatttaaagcgccatctctgttggtctttgctcgaaagagttcccatatttgcg
aaaatggacaaacaattactggacgtgttgtgtgaaagactgaaaccagcactattcacg
gagaagagcttcataatacgagaaggcgatccagtagaagaaatgctctttctaatgaga
ggtacactgttaacaatgaccacaaatggtggaagaactggttttttcaactctgttcat
ctcaaggttggtgacttctgtggagatgagcttttgccatgggctttagacccccatcct
tcctccagtattcttccaatttcgactagaacagtgcaggctgtaactgatattgaagtt
tttgccctcactgctgatgacctcaagtttgtcacctcgaaatttggatgtctgtatagc
aagcaacttcagcatacttacaggttcttctcacaacaatggaggacatgggctgcatgc
tttatacaagtagcatggcatcgacactgcaggaataagctcgggaaatccttaagagag
gaagaagatagactgcaggctacattagcaaaagagagcacaaatgcaccaagtcttgga
gctaccatataa
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