Solanum dulcamara (climbing nightshade): 129880723
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Entry
129880723 CDS
T09577
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
129880723
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdul04040
]
129880723
Ion channels [BR:
sdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129880723
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
129880723
NCBI-ProteinID:
XP_055810875
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Position
2:74204077..74210691
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AA seq
724 aa
AA seq
DB search
MMNSRQEKYVRFQDWKSEQSSFSIDHQNSPDNRPFYFRKPSFNSLMSSAKRRLERGSERI
CSWRKSIRVHPLTDKPIKDQYVASKKTVLDPQGRFLQLWNKVFVLVCVIAVSLDPLFFYI
PVIDNKNKCLDLDKTLKITACVLRSISDVFYIFHIILQFRTGFIAPPSRIFGRGELVEDS
YAIAKRYLLSYFIVDVVAVLPLPQIVILLITPNANGPIALATKEMLKIVIFAQYVPRIFR
IYPLYKEVTRTSGLFTESAWGGAVFNLSLYMLASNVIGAFWYLFSVERQDTCWRSACDKI
PTCSLDYLSCDRNGNGNAFLLNSSCPLLQQEDIKDPNVFDFGIALDALQFRVVEKRKFWT
KLFYCFWWGLRNLSSLGQNLKTSTFVGEILFAVFISIIGLILFSLLIGNMQKYLQSITVR
VEEMRVRRRDAEQWMSHRMLPDNLKERIRRHEQYKWQENRGVEEDLLLHNLPRDLRRDLK
RHLCWSLLRKVPIFEKMDDQLLDALCDRLKPALFTEKSFIIREGDPVEEMLFLMRGTLLT
MTTNGGRTGFFNSAHLMAGAFCGDELLTWALDPHPSSSSLPISTRTVEAVTDIEAFALTA
DDLKFVAAQFRRLNSKQIQHTFKFCSQQWRTWAACFIQVAWRRHCRNKLEKSLREEEDRL
QAALAKESTNAPSLGATIYASRFAANALRALRSKRTTAAKLPPTLPLLLHKPAEPDFSEE
NDII
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattccaggcaggagaaatatgtaaggtttcaggactggaagtcagaacaatca
tccttcagcattgaccatcaaaattctccggataataggccattttatttcagaaaacca
tcatttaactcgttgatgagcagtgccaaaagaaggctcgagaggggttctgaaagaatt
tgtagctggagaaaatcaattcgcgtgcatcctctaactgataagccaataaaagatcaa
tatgtagcatcaaagaagacagttcttgatcctcaggggcgatttcttcagctatggaac
aaagtatttgtattggtttgtgtaattgcggtgtcacttgatccattgttcttctacatt
cctgtcattgataacaaaaataagtgcctcgatttggacaagacgttaaagatcactgct
tgcgttctgcgttctatcagtgatgttttctatatctttcacattatcttgcaatttcgt
actggcttcattgctcctccttcacgaatttttggaaggggtgagctggttgaagattcc
tatgctatagccaagcgatatttgttatcttatttcatcgttgacgttgtagctgtcctt
ccactcccacagattgtaatattgcttatcactcccaacgcgaatggccccattgctttg
gcgacgaaagaaatgttgaagattgtcatttttgctcaatatgttccaagaatttttaga
atttatccattgtacaaagaagtaacaaggacttcaggcttatttactgaaagcgcatgg
ggtggagctgttttcaacctttccctctacatgctagccagtaatgtaattggagccttt
tggtatttgttctcagtagaacgccaagatacatgctggcgcagtgcgtgtgacaagatc
cccacctgttcgttagactacttatcttgtgacagaaatgggaatggaaatgctttctta
ctgaattcttcttgccctctcctccaacaagaagatataaaagatccaaatgtctttgat
tttggaatcgctcttgatgctcttcagtttcgggttgtggaaaaaaggaaattctggacc
aaactcttctattgcttttggtgggggctgagaaatttaagttctcttggccaaaacctt
aagacaagcactttcgtcggagagattctctttgcggtcttcatctcaattatcgggctt
atcttgttttccttgcttattggcaatatgcagaaatatttgcaatctatcacggttaga
gtagaagagatgagagtgagaaggcgggatgcagaacagtggatgtctcatcgcatgctt
cctgacaatctgaaagagcgaattagaagacatgaacaatacaaatggcaagaaaacagg
ggagttgaggaagatttactgcttcataatcttcctagagacttgaggagagatttaaag
cgccatctctgttggtctttgctgagaaaagttcctatatttgagaaaatggatgaccaa
ttactggacgcattgtgtgatagactgaaaccagcactcttcacagaaaaaagcttcata
atccgagaaggtgatccagtagaagaaatgctctttctaatgagaggtacactgttaact
atgaccacaaatggtggaaggactggttttttcaactctgctcatctcatggctggtgcc
ttctgtggagatgagcttttgacatgggctttagacccccatccttcctccagtagtctt
cctatttcgactagaacagtggaggctgtaactgatatagaagcttttgccctcactgct
gatgacctcaagtttgtcgccgcgcagtttagacgtctaaatagcaagcagattcagcat
actttcaagttctgctcacaacagtggaggacatgggctgcatgctttatacaagtagca
tggcgtcgacactgcaggaataagctcgagaaatctttacgagaggaagaagatagactg
caggctgcattagctaaagagagcacaaatgcaccaagtcttggagctaccatttatgca
tcaaggtttgctgctaatgcgctgcgcgccttgcgaagtaagcgcacaactgctgcaaaa
ttacctcccacattacctctgctgcttcataaaccagctgaaccagattttagtgaggaa
aatgatatcatctag
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