Solanum dulcamara (climbing nightshade): 129880884
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Entry
129880884 CDS
T09577
Name
(RefSeq) coronatine-insensitive protein 1
KO
K13463
coronatine-insensitive protein 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129880884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129880884
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129880884
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_14
Motif
Other DBs
NCBI-GeneID:
129880884
NCBI-ProteinID:
XP_055811096
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All DBs
Position
2:complement(78601409..78607311)
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AA seq
603 aa
AA seq
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MEERNSTRLSSSTNDTVWECVIPYIQESRDRDAVSLVCKRWWQIDAITRKHITMALCYTA
KPDQLSRRFPHLESVKLKGKPRAAMFNLIPEDWGGYVTPWVVEITKSFSRLKTLHFRRMI
VRDSDLELLANRRGKVLQVLKLDKCSGFSTDGLLHISRSCRNLRTLLMEESYIIEKDGEW
VHELALNNTVLENLNFYMTDLVQVRAEDLELIARNCKSLISMKISECEITNLLGFFRAAA
ALEEFGGGAFNDQPELVAENGYNEQLGKYAAIVFPPRLCQLGLTYLGKNEMSILFPIASC
LRKLDLLYALLDTAAHCFLLQRCPNLEILETRNVVGDRGLEVLGQYCKRLKRLRIERGAD
DQEMEDEEGAVTHRGLIDLAKGCLDLEYMAVYVSDITNEALEIIGTYLKNLSDFRLVLLD
REERITDLPLDNGVRALLTGCHNLRRFALYVRPGGLTDVGLTYVGQYSPNVRWMLLGYVG
ESDHGLLEFSKGCPSLQKLEVRGCCFSERALALAALQLKSLRYLWVQGYRASSAGRDLLA
MARPFWNIELIPARRVVANDGNNGEAVVSEHPAHILAYYSLAGQRTDFPDTVKPLDPTYL
LAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgcaactcaacgcgattgagtagctcgacgaacgatacagtatgggagtgt
gtgattccgtacatacaggaatcgcgtgacagagacgctgtgtcgttggtatgtaagagg
tggtggcagatcgatgcgataactaggaagcatataactatggcgttgtgttatacagcg
aagccggatcagctttcgagaaggtttcctcatcttgaatcggttaaactgaaagggaaa
ccaagagctgctatgtttaatttgataccggaagattggggaggatatgttacaccttgg
gttgttgaaattactaagtcgtttagtagattgaaaacacttcattttcgtagaatgatt
gttagagattcggatcttgaattgcttgcgaatcgtcgtggtaaagttcttcaggttttg
aagctggataagtgttctggattttctactgatggtcttctgcatatttctcgttcctgc
aggaacttaagaactttgttaatggaagagagttatataattgagaaggatggagaatgg
gtacatgaactagcattgaacaacacagttcttgagaatttgaacttttacatgacggac
cttgtgcaagttagggctgaagatcttgaattgatagcaagaaactgtaaatctcttata
tctatgaaaattagcgagtgtgaaattacaaatcttcttggcttctttagagctgcagct
gcgttggaggagtttggtggtggcgcatttaatgaccaaccagaacttgttgctgaaaat
ggctataatgagcaattgggaaaatatgccgcaatagttttccctccaagattatgccaa
ttgggcttgacatacttagggaaaaatgagatgtccattctctttcctattgcttcttgt
ctgaggaaattggatctgctttatgcacttcttgacacagcagcccactgtttcttactg
caaaggtgtcccaacttggagattcttgagacaaggaatgttgttggggatagaggattg
gaagtgcttggccagtactgtaagaggttaaagcggctcaggattgagagaggagctgat
gatcaggagatggaggatgaagaaggtgcggttacacacagaggattgattgatttggca
aagggatgccttgatctagaatacatggctgtttatgtgtcagatattactaatgaagct
ttggaaattattggtacatatctgaaaaatctgagtgattttcggctggtcttgcttgac
cgagaagaaagaataacagatctgccacttgataatggtgtccgtgctttactaacaggt
tgccataatcttagaaggtttgccctctatgtccggcctgggggccttactgatgtaggt
ctcacttatgtcgggcaatacagcccaaacgtgagatggatgcttctgggatacgttggg
gaatccgatcacggccttctggagttctctaaaggatgtccgagcctgcaaaagctagaa
gtgagaggctgctgtttcagtgaacgtgcattagctttggctgccttgcagctaaaatcg
ttaaggtacctgtgggtacaaggatacagggcatcttcagctggtcgtgatctcttagcg
atggctcgcccattctggaatattgaattgattccagcaagacgagttgttgccaacgat
ggaaataatggagaagctgtagtctccgagcatccagcccatatacttgcctactattct
cttgccggacaaagaacagattttccagacactgtcaagcctttggacccaacttacctt
ctcgctgaatag
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