Solanum dulcamara (climbing nightshade): 129880919
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Entry
129880919 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129880919 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129880919
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129880919
Membrane trafficking [BR:
sdul04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
129880919
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
129880919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WDR55
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_Nup120_160
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
129880919
NCBI-ProteinID:
XP_055811151
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Position
2:79231612..79248989
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AA seq
762 aa
AA seq
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MRSSMSLENSSSAPSTSRSSPPAASQNLNCKHSNVFQLLTRREVTPRTKRASRKFWGENT
KCTLDSYGLKREVASDARRGLMSWVEAESLQHLSAKYCSLLPPPRSTIAAAFSPDERTLA
STHGDHTVKIIDCQTGKCLKVLSGHRRTPWVVRFHPLYPEILASGSLDHEVRLWDAKTAE
CIGTRDFYRPIASIAFHAQGEVLAVASGHKLYIWHYNRRGEAPSPAIILKTRRSLRAVHF
HPHAAPFLLTAEVNDLDSSDPSMARATSPGNLRYPPPTVYLTNAHSTYQSASANELPIMS
LPFLIWPSIARGDPRMLMQQSDTDVGSDSIQQRADTSSSVRLLTYSTPSGQYELLLSPIE
QSASPAQEAHTSSSVRENETGTQPLVDPMETDVLPEERNNQFFPFSDPAYWELPFLQGWL
IGRSQAGQQTTRSELSGATINPSTYGELENPSAVPLVISSNSHPRSGRSGSRHRSSRSRA
IPVAEAGDGAAPINVVHDESDSQTSIGRIQSEIATSLAAAAAADLPCTVKLRIWPYDIKV
PSAPLDAERCRLTIPHAVLCSEMGAHFSPCGRFLAACVACILPNLDSDPGFHGHLHHDTM
AAATSPTRHPVAAHQVMYELRIYSLEEATFGSVLAARAIRAAHCLTSIQFSPTSEHLLLA
YGRRHSSLLKSVVIDGDTTIPIYTILEVYRVSDMELVRVLPSAEDEVNVACFHPSIGGGL
VYGTKEGKLRILQYDNSNSLGRTISCTPVENMLEVPSYALEG
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgtctatgtcgcttgagaattcaagcagtgctccgtcgacgtcgaggagttct
cctcctgcggcatctcaaaacctcaattgtaaacacagtaatgtctttcagctgttaaca
aggagggaggtaactcctcgaactaaacgcgcttccagaaagttttggggtgagaatact
aaatgtactcttgactcctatgggttaaaacgcgaagtggcaagtgatgctagacgggga
ctaatgtcgtgggtagaggcagagtcattgcaacatttatctgccaagtattgctcactg
ttgcctcctccaaggtctaccattgcagcagcattcagtcctgacgagcggacacttgct
tctacgcatggagatcacacagtgaaaataattgactgccaaactgggaaatgcttaaag
gttttgagtggacaccgcaggacaccttgggtggttcgtttccatccattgtaccctgaa
atacttgcaagtggaagtttggaccatgaagttcggttgtgggatgcaaaaactgcagag
tgtataggaacgcgtgatttttatcgtcccattgcatccattgcattccatgcccagggg
gaagttctggctgttgcttcaggccacaagctttacatatggcactataacagaagagga
gaggctccttcaccagcaattatactgaagacacggcgttctcttcgtgctgtgcatttc
cacccacatgccgccccgtttcttttaacagctgaggtcaacgatctggactcatcagat
ccctcaatggctcgtgcgacctctccgggaaacttgcggtatcctcctcctactgtgtat
ttgactaatgctcattccacctatcaatctgcttcagcaaatgaactgcctatcatgtct
ctaccattcctgatctggccttcaattgctagaggtgatcctagaatgctcatgcagcag
agtgatacagatgtgggatctgacagtatacagcagagagcagacacttcgtcatctgtc
cgccttcttacatattcaactccatccggccagtatgaacttttattgtcgcctattgag
caaagtgcatctcctgcacaagaagctcatactagttcttctgtcagggaaaacgagaca
ggtactcaacctttagttgatcccatggagactgatgtgctgccagaagagagaaacaat
caatttttcccttttagtgacccggcatactgggagttgccttttttgcaaggatggtta
attggccgaagccaagctggccaacaaacaactcgttcagagcttagtggtgctaccatc
aatccatcaacttatggtgaactggaaaatccttctgctgttcccttggtaatttcaagc
aatagtcatccaagatctggaagatctggttctcggcaccgttcttcacgctctcgagcg
atccctgttgctgaagctggtgatggtgctgcccccattaatgttgtgcatgatgagagt
gattctcaaacttctattggtcgcatccagtctgagatagctacttcgctagctgcagca
gcagctgctgacttaccctgcactgtgaaactcagaatatggccttatgatattaaggtt
ccatctgcaccacttgatgctgaaagatgtcgcttaacaatacctcatgccgtactttgc
agtgaaatgggagcccatttttcaccatgtgggagatttttagcagcttgtgttgcatgt
attctgccaaacttggactctgatcctggttttcatggtcatcttcatcatgatactatg
gcagctgctacttctccaaccagacatcctgttgctgcccaccaggttatgtatgagctg
cggatatattccctggaggaggcaacgttcggttccgtgcttgcagctcgggcaattaga
gctgctcattgtttaacttcaattcagttttctccaacttcagagcatctgttacttgct
tatgggcgtcgccatagttcactactgaaaagtgttgtgattgatggagatacaactata
cccatttacactattcttgaggtctatagagtttctgatatggaacttgtgagagttctt
cccagtgcggaggatgaggtcaatgtcgcttgtttccatccttcaattggtggtggtctt
gtctatggaaccaaggaagggaagttgaggattctccaatatgacaattcgaacagcctg
ggtcgcacaatatcgtgtactcctgtcgagaacatgctcgaggtcccgtcgtatgcttta
gaaggctag
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