Solanum dulcamara (climbing nightshade): 129880949
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Entry
129880949 CDS
T09577
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00450
Selenocompound metabolism
sdul00970
Aminoacyl-tRNA biosynthesis
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
129880949
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129880949
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdul01007
]
129880949
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129880949
Enzymes [BR:
sdul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
129880949
Amino acid related enzymes [BR:
sdul01007
]
Aminoacyl-tRNA synthetase
Class I (U)
129880949
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
129880949
Prokaryotic type
Other AARSs
129880949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
CoV_peptidase
tRNA-synt_1e
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
129880949
NCBI-ProteinID:
XP_055811201
LinkDB
All DBs
Position
2:79886502..79898882
Genome browser
AA seq
806 aa
AA seq
DB search
MGDNCKATPKVPIEGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRIRGYNAIY
MCGTDEYGTATETKALEENCTPKQICDKYHAIHKEVYKWFDISFDEFGRTSTPQQTEVCQ
AIFKKLWENDWLSENTMQQLYCDTCKKFLADRLVEGNCPTPGCNYDSARGDQCEKCGKLL
NPTELIEPRCKVCRNTPCIRDTDHLFLELPLLKDKLEAYINNMSLSGGWSQNAIYTTHAW
LREGLKSRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSGYTTEWEKWWKNPDN
VELYQFMGKDNVPFHTVIFPSTLLGTGESWTLMKTISVTEYLNYEAGKFSKSKGIGVFGN
DVKDTHIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLSNLGNFVNRVLSFIAKDP
ASGYGSIIPDAEGAESHSLTKALGEKVRSCVLQYIEAMEKVKLKQGLKVAMSISSEGNGY
LQESQFWKLYKEDRPSCSIVMRTACGLVYLLACLLEPFMPSFSREVLKQLNLPPETQFSL
SDEGGDIENSKRPWDILPAGHKIGTPAPLFKELKDEEVEFYRNKFAGSQADRADRVLKAE
TEAKEMAEQLNKTKISDGNKKKERATKSSETKSKAPASVEGEISISRLDIRVGLITKAQK
HPDADSLYVEEIDVGEALPRTVVSGLVKYIPLEEMQNRKVCVLCNLKPASMRGIKSQAMV
LATSNSDHTKVELVEPPKDAVIGERVTFLGFDGKPDDVLNPKKKVWETVQVDLHTNKELV
ACYKDVPFTTSVGICKVASISEGTIR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataattgtaaggctactccgaaagtcccaatcgaaggcaaaagaaacatccta
attaccagtgctttgccttatgtcaacaacgttcctcatcttggcaacatcatcggctgt
gtgttgagtgcggatgtgtttgcgaggtactgtaggataagaggatacaatgcaatatac
atgtgtggtacagatgagtatgggacagcaactgagactaaagctttggaggaaaattgt
actccaaagcaaatttgcgacaaataccatgcaattcacaaagaagtttataaatggttt
gatataagctttgatgaatttggacgtacatcaacaccacaacagacagaagtttgtcaa
gcaattttcaagaagctctgggaaaatgattggctttctgagaatacaatgcagcagctt
tactgtgacacctgcaaaaagttcttagcggatagacttgtagagggtaactgtccaaca
ccaggttgcaactacgattctgcacgaggagatcaatgcgagaagtgtgggaaactatta
aatcccacagaactaatagagccaagatgcaaggtttgtcgcaacaccccgtgtatccga
gatacagatcatttgtttcttgagctccctttgctgaaggataagttagaagcatatatc
aacaacatgtcattgtccgggggatggagtcagaatgctatctatacaacacatgcatgg
cttagagaaggacttaaatcaaggtgtataactagagatttgaaatggggagttccagta
ccacatgaaaaatacaaggataaggttttctatgtatggtttgatgctcctattggatat
gtgtcaatcacctctggctacactactgagtgggagaagtggtggaagaatccagataat
gtggagctgtatcagtttatgggcaaggacaatgtgccttttcacactgtaatattccca
tctacgcttcttggaactggtgaaagctggacgcttatgaaaactatcagtgtaacggaa
tatttgaactatgaagcaggcaaattctcaaagagcaagggtataggagtttttggtaat
gatgttaaagatacacatattcctgtagaagtatggagatattacttgctgacaaacagg
ccagaggtctcagacactttgtttacatgggcagacctacaagcaaagttaaacagtgag
ttgctaagcaacttaggcaatttcgtcaatagagtcctgagtttcatcgcaaaagatcca
gcctcaggttatggttcgattattcccgacgctgaaggagcagaatcacattccttgaca
aaggcattaggcgaaaaagttagaagttgtgtcctgcaatatatagaagccatggagaag
gttaaattaaagcaaggtttgaaggttgctatgtctatttctagtgaaggaaacggttat
ctgcaggagagccaattttggaagctttacaaggaagataggccttcctgttcgatagtg
atgaggactgcttgtggtctagtatatcttctcgcatgtcttttagagccatttatgcca
tctttttcacgagaggtgcttaagcagctcaacttgcctccggaaacacaattttcactg
tctgatgaaggaggtgacattgaaaatagcaaaagaccatgggatattctacctgcaggt
cacaaaattggaacaccagcaccattgttcaaggagctgaaagatgaagaggttgaattc
tacagaaataagtttgctggaagtcaggcagatagagcagatagggttctgaaggcagaa
actgaggccaaagagatggctgaacaattgaacaaaacaaaaatatcagatggtaataag
aagaaggaacgtgcaacaaaatcttctgaaaccaaatctaaggccccagcctctgttgaa
ggagaaatttccattagtagacttgacattcgtgttggcctcataaccaaagcgcagaaa
catcctgatgctgattcattgtacgtggaagaaattgatgttggtgaagctctgcccaga
actgttgttagtggccttgtaaaatatattcctcttgaggagatgcagaatcggaaggtc
tgtgttctatgcaacctaaaaccagctagcatgagggggataaagtcacaggcgatggtt
cttgccacttctaatagtgatcacactaaggttgaactggtcgagccaccaaaagatgct
gtgattggggagcgagttacattcctcgggtttgatggcaagccagatgatgtcttgaac
ccgaagaagaaagtttgggaaaccgttcaggtggatttacataccaataaggagttggtt
gcctgttataaagatgtgccattcaccacatcagttggtatttgcaaggttgcatctatt
tctgaaggaacaataaggtag
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