Solanum dulcamara (climbing nightshade): 129880955
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Entry
129880955 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129880955
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129880955
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129880955
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129880955
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129880955
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129880955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
129880955
NCBI-ProteinID:
XP_055811207
LinkDB
All DBs
Position
2:79995535..80005688
Genome browser
AA seq
1015 aa
AA seq
DB search
MGKKAKKKARSGVKETWNPVASANPIDENSSPNVDTPDDAVVVVNDRKGCPHVDKVIDVD
KVSAKLEFSESVRCEDCREGVADRQASRTKGKHGKKKGSAYPKQKSKAIWVCLVCGHFSC
GGVGLPTTPQSHAVRHARCYHHPLAVQFENPQLRWCFLCNTLLHAKKVEDDSEQKDVVED
IAKMIKRRPTERPTTDVEAIWFGSGSVTSEIKSEASASVGVDGKVDYVIRGLINLGNTCF
FNSIMQNLLAMNRLRDYFLKFDGFAGPLTAGLKKLFAETSNEAALKKSVNPKSLFGSLCA
KAPQFRGYQQQDSHELLRCLLDRLCTEELTRRKQIKSSQDGGKSLSSCPTFVDDIFGGRL
SSTVSCLECGHTSVVYEPFLDLSLPVPTKKPPSKGAQSISHAKIISKPPKRIGKVLPKVS
RDAASLNAQANGEKSLSHVHPRVPVTEGMKVPSDASLESIDAGVMADNMGLTSQDSYSSK
KSHYEQNCVGVTRQLATVDDSTWLDFLDQNTLPNGESTALQVDHILTNQGSETGSVQPVD
HLQNNLDADTEMKLTCTDSTCSPNDLMCLDDQGQCKSPDCDIASEFSKKLLIKESGKICS
VDSNLGTDSYMRLLEDEAPLQLQESEILLLPYKEATSTSGDMLKEGCDISSVAVGWEQDS
LDLDGVGNLFNEPESDARPSDQPLCNAAVSQANGLREASFTVSNISESDPEEVDNTDAPV
SVESCLAYFTKPELLPKSEHAWQCENCRKVLKEKRMKSKNKLMKPRSHSMVNGHEDRNSN
GVSSSGTSPLTGLGTHNGSTEKDALETSDDRLLSPNETSPQAERDSVSWLSENSTQGNQG
EASNQVNSDYQNNKIQLLEAPLISAKSESEESENEETDFKRVRVERDATKRILIDKVPSI
LSIHLKRFSQDARGRLSKLSGHVNFRDTVDIKPYVDSRCLQKETYKYHLIGVVVHSGTMR
GGHYVAYVREDPKITGKDKNTEDFTWYYASDTHVREVSLEEVLRSEAYILFYEET
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaggctaagaaaaaggctagaagtggtgtcaaggagacgtggaatcccgtg
gcatctgcaaatcctattgatgaaaatagcagtccaaatgttgatactcctgatgatgcg
gttgttgttgtaaatgatagaaaaggatgtccacatgttgataaagttattgatgtggac
aaagtctccgctaaacttgagttttcagaatctgttaggtgcgaagattgcagggaagga
gtagctgatagacaagctagtaggacaaaaggtaaacatggaaaaaagaagggaagtgca
tatcccaagcagaagtctaaagccatttgggtctgtttagtatgtggccatttctcgtgc
ggaggtgttgggttgcctactacacctcagagccatgcagttcggcatgcaagatgttac
catcaccctctcgctgtacagtttgaaaatcctcaactgcgttggtgttttctgtgcaat
acactacttcacgctaagaaagtagaggatgacagtgaacaaaaagatgtagttgaggac
attgcaaagatgattaaaaggcgtccgactgaacggcctactactgatgtggaggctatt
tggttcgggagtgggagtgtcactagcgaaattaaatcagaagcttctgcttctgtaggc
gttgatggaaaagttgattatgtcattaggggattgattaatttagggaatacatgtttt
ttcaattcaataatgcagaacctactggcaatgaatagattacgggattacttccttaag
tttgatggttttgctggtcctcttaccgctggtctgaagaagctctttgctgagacaagc
aatgaggctgcgttgaaaaaatctgtaaatccaaaatctttgtttggttcattatgtgcc
aaagctccacagtttcgaggataccaacaacaggacagtcacgaattgcttcgttgttta
cttgatcgtctgtgtactgaggaattgacccgcagaaagcaaatcaaatcttctcaggat
ggaggtaaatccttgagttcatgtccaacttttgtcgatgacatctttggtggccgactt
tcaagcactgttagctgtcttgagtgtgggcacacttcagtagtctatgagccattcttg
gatctctcattgcctgttccgacgaaaaaacctccatctaaaggagctcaatcaatctcc
catgccaaaataatatcaaaacctccaaagagaatcggaaaagttcttcctaaagttagc
agagatgcagcttctcttaatgctcaagcaaatggagagaaatctctcagtcacgtgcat
cctagagtacctgtcactgaaggaatgaaagttccttctgatgcatcgctagaatccatt
gatgctggtgttatggctgataatatgggtttaacttcccaggactcatattccagtaag
aagtctcattatgagcaaaattgcgtgggtgtgactagacagttggctacggtggatgat
tcaacatggttagattttctcgatcagaatacactgccaaatggtgagtcaacagcttta
caagttgatcacatcctgactaatcagggttctgaaactggatctgttcaacctgttgac
catttgcaaaataatctggatgctgatacagagatgaagttgacatgtacagacagcact
tgttctcctaatgatttgatgtgtttggatgaccaaggacaatgcaagtcaccagactgc
gatatagcttctgaattcagtaaaaagttactgattaaagagtctggaaagatctgctct
gtggattcaaatcttggaacagattcatacatgaggcttttggaagatgaagccccatta
caactacaagagtcagagattctgttacttccatacaaagaagcaacctccacttctggt
gacatgttaaaagaaggttgtgatatatcctcagttgctgttggttgggaacaagattca
ttggacttggatggtgttggaaatctatttaatgaacctgagtctgatgcacgaccttct
gatcagcctttgtgcaatgctgctgtttctcaggccaatggactcagagaagctagtttt
actgtttcaaacatcagcgagtctgatccagaagaagttgataatacagatgctccagta
tcagtggagagttgtttggcttattttacaaagcccgagcttcttcccaaaagtgaacat
gcttggcaatgtgaaaattgcagaaaagttctaaaagaaaagagaatgaaatctaagaat
aagttgatgaagcctagatcacatagcatggtgaatggacatgaggacagaaattcaaat
ggcgtgtcttcttcaggaacatctcctctgactggactgggaactcataatggaagtaca
gaaaaagatgcgttggaaacttctgatgacaggttgttgtccccaaacgaaaccagccct
caagctgagcgagattcagtgtcttggctatcggaaaacagcacacagggaaatcagggt
gaagctagtaatcaagtgaatagcgactatcagaacaataaaattcaattgctggaagct
ccgctgatttctgctaaatctgaatctgaagaaagtgagaatgaggagacagactttaaa
agagttagagttgagagagatgcaactaaacggatcctaattgataaggtcccttctatt
ttgtctattcatttaaagaggttcagtcaagatgctcgggggcgcttgagtaagctgagt
ggccatgtcaattttagagatactgttgatatcaaaccatatgttgactccaggtgcctg
cagaaggagacatacaaataccatcttattggtgtagtagtacattcggggacgatgagg
ggaggtcattatgttgcatatgtcagagaagatcccaagatcacagggaaagacaagaac
acagaagattttacgtggtattatgcaagtgacactcatgttcgtgaggtctcgttggag
gaagttcttcgttctgaggcatacattttattttatgaagaaacttga
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