Solanum dulcamara (climbing nightshade): 129881007
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Entry
129881007 CDS
T09577
Name
(RefSeq) two-component response regulator ARR1-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129881007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129881007
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
129881007
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Ortholog
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GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
129881007
NCBI-ProteinID:
XP_055811279
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Position
2:80793728..80804584
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AA seq
555 aa
AA seq
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MNLGVGSVVKNMSVSSCSVSWKSGSSDKVSDQFPAGLRVLVVDDDPTCLRILENMLRNCH
YEVTKSNRAELALSMLRENRNGFDIVISEVHMPDMDGFKLLEHVGLEMDLPVIMMSADDS
KDAVMKGITHGACDYLIKPVRIEALKNIWQHVIRKKKHEWKGKDFDQSTSVEDGDQQQKP
PEDVDYSSSANEGNWKSSKRRKEEEDETEKRDDSSTLKKSRVVWSMELHQQFVQAVKQLG
IDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNGMNNSFLGHPEATYG
TMTSFNGLELQALAATSQLPAQSLATLQAAALVTKSNRAELALSMLRENRNGFDIVISDV
HMPDMDGFKLLDHVVLEMDLPVISLRVLVVDDDPTCLRILEKMLRNCHYEVTKSNRAELA
LSMLRENRNGFDIVISEVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKDAVMKGITHGA
CDYLIKPVRIEALKNIWQHVIRKKKHEWKDKDFDQSTSVGIFKIPLFLFVGIFLLFFFSF
SYIFPCKFVEKISKI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttggtgttgggtcagtggtgaaaaacatgtctgtgtctagttgtagtgtttct
tggaaatccggtagtagtgataaagtttccgaccagtttccggcaggtttaagagtactt
gttgtagatgatgatcctacttgtctaaggatcttggagaatatgcttaggaattgccac
tatgaagtcaccaagtcgaatcgagcagagcttgcattatcaatgctccgagaaaacaga
aatggttttgacattgttattagtgaagtgcacatgccagacatggatggtttcaaactt
cttgagcatgttggtctggaaatggacctgcctgttataatgatgtctgcggatgacagt
aaggatgccgttatgaaaggtattactcatggtgcatgtgattatctgatcaaaccggtg
cgtatcgaggcattgaagaacatttggcagcatgtgattcgtaaaaagaagcacgagtgg
aagggcaaagattttgatcaatcaacaagcgtggaagatggagatcaacagcagaaaccg
ccagaagatgtcgattattcatcgtcagctaatgaagggaactggaaaagctcaaagcga
agaaaggaggaggaagatgaaactgaaaaaagggatgattcatccacattaaagaagtca
cgtgtggtttggtcgatggagcttcatcaacagtttgtacaagctgtcaaacaacttgga
attgacaaggctgttcccaagaaaattctcgagctgatgaatgttcctgggctaaccaga
gaaaatgttgctagccaccttcagaaatatcggctgtacctaaggaggttgagtggtgta
tcacagcatcagaatggaatgaataactcgtttctgggacacccggaagcaacatatggg
acgatgacttctttcaatgggttagagcttcaagctttagctgccaccagtcaactaccc
gcacaaagtcttgctaccctccaggcggctgcactagtcaccaagtcgaatcgagcagag
cttgcattatcaatgctccgagaaaacagaaatggttttgacattgttattagtgatgtg
cacatgccagacatggatggtttcaaacttcttgatcatgttgttctggaaatggacctg
cctgttataagtttaagagtacttgttgtagatgatgatcctacttgtctaaggatcttg
gagaagatgcttaggaattgccactatgaagtcaccaagtcgaatcgagcagagcttgca
ttatcaatgctccgagaaaacagaaatggttttgacattgttattagtgaagtgcacatg
ccagacatggatggtttcaaacttcttgagcatgttggtctggaaatggacctgcctgtt
attatgatgtctgcggatgacagtaaggatgccgttatgaaaggtattactcatggtgca
tgtgattatctgatcaaaccggtgcgtatcgaggcattgaagaacatttggcagcatgtg
attcgtaaaaagaagcacgagtggaaggacaaagattttgatcaatcaacaagcgtgggt
atttttaagatacctttgttcttgtttgttggtatttttcttcttttctttttcagtttt
tcatacatatttccatgtaaatttgttgaaaaaatttcaaaaatttga
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