Solanum dulcamara (climbing nightshade): 129881067
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Entry
129881067 CDS
T09577
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129881067
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129881067
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129881067
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129881067
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129881067
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129881067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
MATH_2
MATH
TRAF_BTBD17
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
129881067
NCBI-ProteinID:
XP_055811370
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All DBs
Position
2:complement(81756812..81772460)
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AA seq
739 aa
AA seq
DB search
MKGPFSFSTFSTSFSLSQSTPAQQSCRTCFTVSRSPATTILTPPMDVRVKKEQNEKEQEV
KAEACFYIMIKVARDEDLGEQIGKEIYFDLVDHDKVRTFHIQKQMPFTQFKEEVAKAFGI
PVPFQRYWLWAKRKNHTYRPDRALTAQEEIQPVGELREVSNKWNNDELKLFLEVELCLDL
RPLHPPGKTTREEILLFLKLYDPLKETIRYVGRLSVRGSGKPLDIKTKLKELAGFSPDEE
IELFEEIRFEPSVMCEKIDSMLSFSECQLEDGDIICFQKSLQNLCSEQFRFPEVPSFLEY
MHNRQVRVKKVQEEKEQKGKEKAEACLYTMIKVARDEDLGEQIGKEIYFDLVDHDKVRTF
HIQKQMPFTQFKEEVAKAFGIPVPFQRYWLWAKRKNHTYRPDRALTAQEEIQPVGELREV
SNKWNNDELKLFLEVELCLDLRPLHPPGKTTREEILLYLKLYDPLKETIRYVGRLSVRGS
GKPLDIKTKLKELAGFSPDEEIELFEEIRFEPSVMCEKIDSMLSFSECQLEDGDIICFQK
SLQNLCSEQFRFPEVPSFLEYMHNRQPEEHKMLVPSSDFSTKKPQLIEVAPADTTNRVDG
QAVDDPASARFTWTVDKFSRLNVKKLYSDAFNVGGYKWRILIFPKGNNADHLSIYLDVAD
AATLPYGWSRYAQISLAVLDQVHGKFTMRKNTKHQFNASKSDWGFTSFIPFTELHDPGRG
YLVDDKIILEADVSMPKSQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcctttttctttcagtaccttttccacttccttttccttgtcacaaagcact
ccagctcaacaaagttgccgcacctgttttacggtctcccgttctccggcgacgacaatc
ctcactcctccaatggatgtaagagtgaagaaagagcaaaatgaaaaggagcaagaggtg
aaagcagaggcttgtttctacataatgatcaaggtagctcgtgatgaagaccttggtgaa
caaattgggaaggagatttattttgatcttgtggaccatgataaagtgcgtacttttcat
attcagaaacagatgccatttactcaattcaaggaggaagttgctaaggcatttggtata
ccggttccatttcaacgttactggctatgggcaaaacgcaagaaccacacgtatcgtcct
gatcgtgcattgacagctcaagaggaaattcagccagttggtgaactgagagaggtttca
aataaatggaacaatgatgagctcaaactttttctggaagtagaattatgcctggatttg
cgacctttacatccaccagggaagacgaccagggaagaaatccttctatttttaaaactt
tatgaccctctgaaagagacgattaggtatgttggacgtctttctgtaagaggaagtggc
aagccgctggatataaaaacaaagctgaaggagttagctggcttttcgcctgatgaagaa
attgaactctttgaggaaataagatttgaacccagtgtgatgtgtgaaaaaattgacagt
atgctgagtttttctgagtgccagctagaagatggcgatataatttgctttcagaaatcc
cttcaaaatctatgcagtgaacaatttcgctttcctgaggttccttcatttttggagtac
atgcacaatcgccaggtaagagtgaagaaagtgcaagaagaaaaggaacaaaagggaaag
gagaaagcagaggcttgtctctacacaatgatcaaggtagctcgtgatgaagaccttggt
gaacaaattgggaaggagatttattttgatcttgtggaccatgataaagtgcgtactttt
catattcagaaacagatgccatttactcaattcaaggaggaagttgctaaggcatttggt
ataccggttccatttcaacgttactggctatgggcaaaacgcaagaaccacacgtatcgt
cctgatcgtgcattgacagctcaagaggaaattcagccagttggtgaactgagagaggtt
tcaaataaatggaacaatgatgagctcaaactttttctggaagtagaattatgcctggat
ttgcgacctttacatccaccagggaagacgaccagggaagaaatccttctatatttaaaa
ctttatgaccctctgaaagagacgattaggtatgttggacgtctttctgtaagaggaagt
ggcaagccgctggatataaaaacaaagctgaaggagttagctggcttttcgcctgatgaa
gaaattgaactctttgaggaaataagatttgaacccagtgtgatgtgtgaaaaaattgac
agtatgctgagtttttctgagtgccagctagaagatggcgatataatttgctttcagaaa
tcccttcaaaatctatgcagtgaacaatttcgctttcctgaggttccttcatttttggag
tacatgcacaatcgccagccagaagagcacaaaatgcttgttcctagttctgatttttct
actaagaagcctcagctgatcgaagttgcaccagcagacacaacaaatagggttgatgga
caggcagtggatgatccggcatccgcccggttcacatggactgtcgacaaattttcaagg
ttgaatgtgaagaagttgtactctgatgcttttaatgtaggaggatataaatggaggatt
ctgatattcccaaaagggaacaatgcagaccatttatcaatatatttagatgtggcggat
gctgcaacattgccttatggttggagtagatatgctcagattagcttagctgttctcgat
caagttcatggcaaattcacaatgagaaaaaatactaaacaccagtttaatgcaagcaag
agcgactggggtttcacatcattcataccttttactgaactacatgatcctggaagaggt
tatcttgtggatgataaaatcatacttgaagctgatgtttccatgcctaaaagtcagtga
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